Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0759 ATGGAAGATAGTGTGCCAAAAGTTGCACAGGATCAGAAATGGGGAGAGTTGAATATGAGTGAAAAAGAAAAGTTTGAGCTGGACAAAAACCAGGATCCTATGAGTTATTCAAGTGGCATGAACTTGGATTGGAGATTTGGGGATTCAAATCCTCCAAATTCATCTGTGGGTTTGGTTGCCATGGGTAATTCTATGAATGCTAGCAGAGGGGATCTTATTGGTTCTTCTTCATGTTCCTCTGCCTCAATGGTGGATTCATTTGGTCCAAACTTTTGGGACCACCCACCCAATTCCCAAAACATGGGATTTTGTGACATTAATGTTCATAACAATGGGAGCTCTTCAAACACAGTTGGAATTGGAAGAGCTGGTCATGATCATGGAGCAATTGAAATGGGTTGGAACCCGGGTAATCCTATGTTGAAGGGAGATGGTTTTATACCAAATGGACCAGGGATGTTTCCACATAGTTTATCTCAGTTTCCAACTGACTCTGGATTTATCGAGCGGGCTGCGAGATTCTCATGCTTCGGTGTAGGGAATTTCGGTGAAATGGTGAACTCATATGGGGTTCCTCAATCCATGGGTCTGTATGCTGGGACTGGTGGTGTTACAATTCAAGGAACAAGGAATGCTCTTGCAGGGCTTGGATTAAAATCTCAAGAAAACGATCTGAATGTGGTTGAAGCTGCAAAAGATGTGCCACCGTCTGTTGAGCATCTGGCTACTAAAGGAAGCCCACTCAAGAATGATAAAAGAAGCGAAAGTCGTGGCATATCTCAAGATGAAGGGAAACAAGCTATTTTTAGGCCTGCTAATGAGTCCGATAGAGCTGAATCTAGTGATGATGATGGTGGCGGCGGTGGTGGTGGTGATGGCCAAGATGGTTCCCCAATGTTGGAGGGTACTAGTGGGGAACCATCTATTAAAGGACTAAACTCAAAGAAAAGGAAAAGAAGTGGGCAGGATGTTGATAATGATGAAGGCAGTGGAGCTCCAAAACTACTTGGTGAAGGTGCAAAAGATGACCCTGAGAGTCCGCAGAAAGGTGACCAGCGACCAAATTCAACAACCAAGGGTTCTGGTAAGAATACCAAACAAGTGTCTCAAGCTTCTGATCCACCTAACGAGGAATACATACATGTTAGGGCTCGCCGGGGTCAAGCAACAAATAGCCACAGCCTTGCAGAGAGAGTGAGGAGGGAAAAGATAAGCGAGAGGATGAAATTCCTTCAAGACCTTGTACCTGGATGCAGCAAGGTCACTGGCAAGGCCGTTATGTTAGATGAAATCATTAACTATGTACAGTCACTTCAAAGACAAGTTGAGTTTTTGTCGATGAAACTTGCAACAGTAAATCCAAGGCTGGATTTTAATGTTGAGGGACTTCTTGCTAAAGATATTCTTCACCAGCGGCCTGGTCCTTCATCTGCCCTGGGGTTTCCTCTAGAAATGTCTATGGCTTACCCTCCATTACATCCATCTCAACCCGGACTGATTCAGTCATCTCTTCCTAGCATGGCAAACACGTCTGATATCCTTCGTAGAACCATTCACCCACAGTTGGCACCCTTTAGTGGAGGATTCAAGGAGCCAAATCAGCTGCCCGATGTGTGGGAGGATGAGCTTCACAACGTTGTACAGATGAGCTATGCACCAAATGCACCCTTGAACAGCCAAGATGTCGATGGTAATGTGGCACCAAATCAGATGAAAGTTGAACTTTGA 1728 0.4485 MEDSVPKVAQDQKWGELNMSEKEKFELDKNQDPMSYSSGMNLDWRFGDSNPPNSSVGLVAMGNSMNASRGDLIGSSSCSSASMVDSFGPNFWDHPPNSQNMGFCDINVHNNGSSSNTVGIGRAGHDHGAIEMGWNPGNPMLKGDGFIPNGPGMFPHSLSQFPTDSGFIERAARFSCFGVGNFGEMVNSYGVPQSMGLYAGTGGVTIQGTRNALAGLGLKSQENDLNVVEAAKDVPPSVEHLATKGSPLKNDKRSESRGISQDEGKQAIFRPANESDRAESSDDDGGGGGGGDGQDGSPMLEGTSGEPSIKGLNSKKRKRSGQDVDNDEGSGAPKLLGEGAKDDPESPQKGDQRPNSTTKGSGKNTKQVSQASDPPNEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNVEGLLAKDILHQRPGPSSALGFPLEMSMAYPPLHPSQPGLIQSSLPSMANTSDILRRTIHPQLAPFSGGFKEPNQLPDVWEDELHNVVQMSYAPNAPLNSQDVDGNVAPNQMKVEL* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0759 575 CDD bHLH_AtBPE_like 378 463 - -
Lan11g0759 575 Gene3D - 385 458 IPR036638 GO:0046983
Lan11g0759 575 MobiDBLite consensus disorder prediction 350 374 - -
Lan11g0759 575 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 386 457 IPR036638 GO:0046983
Lan11g0759 575 PANTHER BHLH TRANSCRIPTION FACTOR 28 574 - -
Lan11g0759 575 MobiDBLite consensus disorder prediction 311 325 - -
Lan11g0759 575 MobiDBLite consensus disorder prediction 16 30 - -
Lan11g0759 575 MobiDBLite consensus disorder prediction 236 376 - -
Lan11g0759 575 MobiDBLite consensus disorder prediction 245 260 - -
Lan11g0759 575 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 388 438 IPR011598 GO:0046983
Lan11g0759 575 Pfam Helix-loop-helix DNA-binding domain 391 439 IPR011598 GO:0046983
Lan11g0759 575 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 28 574 IPR024097 GO:0006355
Lan11g0759 575 MobiDBLite consensus disorder prediction 554 575 - -
Lan11g0759 575 SMART finulus 394 444 IPR011598 GO:0046983
Lan11g0759 575 MobiDBLite consensus disorder prediction 1 34 - -
Lan11g0759 575 MobiDBLite consensus disorder prediction 269 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0759 Lan-Chr11 6897525 6901793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0759 17 551 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 45.656 6.09e-119 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan11g0759 HLH 7.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0759 - - lang:109340340 965.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0759 11 6897525 6901793 Lan11g0759 11 6897525 6901793 ECH