Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0746 ATGGCTCCAAAATCAAGAACAAGCTCCACCACCATTCATCTATCTCTAATTGTAGCTATTGTTATAGGTAATGTTGTTTTCGCCGATGATAATGTTCCTATTCCAGGTAACAAGGCTCAATTAGATGACTGGTACAAAAAAAATGTGCAACCTTTAGCTCAAAGAAAGGACACCTTAGACCCTGCAGTGATAGCTGCAGAGGGTGCTACATCGGTTATCAAGGTCATGCAAGATGGTAGTGGGAAGTTCAAGACCATCAATGAAGCAATTAAGAGCATTCCGAAAGGAAACACTAAGCGAGTGATTATATACATTGGACCTGGAACTTATAAAGAGAAAATAAAGATTGAGAGAGAAAAACCTTTTATTACTTTGTATGGAGCTCCAGGGAAAATGCCAAACTTGACCTATGGGGGAAATGCACTCAAATATGGCACTGTTGATAGTGCTACCTTAATTGTTGAATCAGATTACTTTGTGGCCGCAAATATGATTATCTCGAATTCTTCACCAAAACCTAATCCAAAGACACAAGGAGGTCAAGCACTTGCGTTGAGAATTTCTGGTGATAAAGCAGCATTCTATAAAGTTACATTATTAGGATTCCAGGACACATTGTGTGAGGATGCAGAATGGCATATTTATAAAGATTGCTTCATTCAGGGCACCGTTGATTTTATTTTTGGAAATGGAAAGGCACTATTTTTGAACACTGAGTTAAGAGTGATGGGCGATTCGGGGATGTCGGTGATAACAGCACAGGGAAGAGATAAGAAGACAGACGATACTGGGTACTCGTTTGTGCATTGTGACATAACTGGGACTGGAACTCGCACTCTTTTGGGAAGAGCATGGATGTCTAAAGCTATAGTAGTCTTTGCTTATTGCAATATAGGCAGTGGTGTGAATGACACCGCATGGAGTAACAACAATCATCCTGAATATGACAAAGCTCTATTTTTTGGAGAGTATAAGAATAAGGGACCTGGTGCAGACCCAAAGGGGCGTTACAAGCATACAAAACAACTCACTGATGCACAAGTTAAACCTTTTATAACGCTTGACTATATTAAAGGTTCAAAATGGTTACTTCCTCCTCCAACTCCTAAAGTATAA 1116 0.3961 MAPKSRTSSTTIHLSLIVAIVIGNVVFADDNVPIPGNKAQLDDWYKKNVQPLAQRKDTLDPAVIAAEGATSVIKVMQDGSGKFKTINEAIKSIPKGNTKRVIIYIGPGTYKEKIKIEREKPFITLYGAPGKMPNLTYGGNALKYGTVDSATLIVESDYFVAANMIISNSSPKPNPKTQGGQALALRISGDKAAFYKVTLLGFQDTLCEDAEWHIYKDCFIQGTVDFIFGNGKALFLNTELRVMGDSGMSVITAQGRDKKTDDTGYSFVHCDITGTGTRTLLGRAWMSKAIVVFAYCNIGSGVNDTAWSNNNHPEYDKALFFGEYKNKGPGADPKGRYKHTKQLTDAQVKPFITLDYIKGSKWLLPPPTPKV* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0746 371 Pfam Pectinesterase 73 359 IPR000070 GO:0030599|GO:0042545
Lan11g0746 371 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 38 364 - -
Lan11g0746 371 PANTHER PECTINESTERASE 63-RELATED 38 364 - -
Lan11g0746 371 ProSitePatterns Pectinesterase signature 2. 220 229 IPR033131 -
Lan11g0746 371 Gene3D - 68 366 IPR012334 -
Lan11g0746 371 SUPERFAMILY Pectin lyase-like 69 365 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0746 Lan-Chr11 6732543 6734439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0746 12 367 Carbohydrate Esterase AT5G07430 54.190 9.36e-138 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0746 K01051 - gmx:100816036 514.998