Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0738 ATGCTGGAAATCTGGAATCAACCACCTAATCAGGGGAAGACTCTATTTAAGAAACTGAAGCACAAAAACAACTCATTTCAAGACACCAAAATGCAGAGAAAGTTGCGCATCATTTGGCATGATCCTGATGCTACTGATTCTTCTTCGGATGAAGGAGGAGATCAAGAAATGCATGGAAATAATAAGAGAACCGTGCTTGAGGTTGCTCTTCCATGTTTTCCTCCGAACTTGGTCACTGGTGATGCTAGCACTGACAGCTCTAGCAACACTGAATTGAGCCAGAAAAGGGTTTTAAATAAAATCCCACCAGCGAAGAGGAGAACTGCTGGCAAATACCGTGGCGTTCGAATGAGGAAATGGGGCAAATGGGCTGCTGAAATTCGTGATCCTTTCAAAGGTGCACGACTCTGGTTGGGAACGTACAACACTGCAGAGGAAGCTTCACAAGCTTATGAGAGGAAAAAGCTTGAATTTGAGATTATGGCTGAAGCTATGTGTGGTGACAAGAGCAGCAATAACAATGCTGATGATGTTCGTGTTTCTGGTGAAGCTATGGCTGCTCAAGATAAGAGCAGCTTCAACTATACTGTTTCTTCTGGTGCAGCTTCTGTATCAGACTCAAGGTCTGCTGCTACTTTGGATGACTCAGAGTGTGTGTTGTCCCATTCGTCACCTTTGTCCGTGCTCGAATTGGACACCTCAACCTCCAAGGCTTCCATTTCGGTGGAGAATGGTAAGGTCTCGAGCAATGAAGTTGTCGTGAAGAAGTGTTTAGAGGCTGAGTTTGCTGAGCTGACCAGTATAGTTGATGAAGGTAGTGAGATGAATGATTTGGAGGCTGAATTGGCAGACCTTGAAATGCCAGATTTGAGTATTTTGAATGCACCACTGCCATCTACTGATGCTCCATCTGCATTTGAGTTTGACTGGTTATCATTCGATGGGTTTGATGATGATCTTGGTGGCCTGGAGGACATTCACATCGGTGGAATTGGTGACGATGGGCCTAGTGCGCTTCCAGATTTCGATTTTGGTGACTTCAGTGCTGATGAGTTTGCTGGTTGGATTGAAGAAGCCCTCCATATACCTTGCATATAA 1098 0.4481 MLEIWNQPPNQGKTLFKKLKHKNNSFQDTKMQRKLRIIWHDPDATDSSSDEGGDQEMHGNNKRTVLEVALPCFPPNLVTGDASTDSSSNTELSQKRVLNKIPPAKRRTAGKYRGVRMRKWGKWAAEIRDPFKGARLWLGTYNTAEEASQAYERKKLEFEIMAEAMCGDKSSNNNADDVRVSGEAMAAQDKSSFNYTVSSGAASVSDSRSAATLDDSECVLSHSSPLSVLELDTSTSKASISVENGKVSSNEVVVKKCLEAEFAELTSIVDEGSEMNDLEAELADLEMPDLSILNAPLPSTDAPSAFEFDWLSFDGFDDDLGGLEDIHIGGIGDDGPSALPDFDFGDFSADEFAGWIEEALHIPCI* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0738 365 CDD AP2 111 177 IPR001471 GO:0003700|GO:0006355
Lan11g0738 365 Gene3D AP2/ERF domain 110 165 IPR036955 GO:0003700|GO:0006355
Lan11g0738 365 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119 13 364 - -
Lan11g0738 365 SMART rav1_2 111 175 IPR001471 GO:0003700|GO:0006355
Lan11g0738 365 PRINTS Ethylene responsive element binding protein signature 112 123 IPR001471 GO:0003700|GO:0006355
Lan11g0738 365 PRINTS Ethylene responsive element binding protein signature 134 150 IPR001471 GO:0003700|GO:0006355
Lan11g0738 365 Pfam AP2 domain 111 158 IPR001471 GO:0003700|GO:0006355
Lan11g0738 365 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 13 364 - -
Lan11g0738 365 SUPERFAMILY DNA-binding domain 111 157 IPR016177 GO:0003677
Lan11g0738 365 ProSiteProfiles AP2/ERF domain profile. 111 174 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0738 Lan-Chr11 6565507 6567814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0738 18 364 AP2-EREBP Transcription Factor Family AT1G68550 32.033 1.89e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lan11g0738 AP2 1.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0738 - - gmx:102667919 346.665