Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0728 ATGTTTAGTGTAAAATCAAGCAATATTGCTATTGGTGGGAGTAACATGCAATATGGAACATTGCACGCGAACCTTGGGCCTTCTGAGATTGCTTCAACAGGGGAAGGGTGCATGGACATGTACCAGAAGGGAATTGTTATGGCTACTTTGCCTATGGGGAATGGGCATGTTGAGAATTGGGGTGATTCAGGCATAGCAGATAATAGCCAACACACTGATGATACTTCCACTGATATTGACACTGATGATAAAAACCAATGCAATAGAACTCAGCATGGGGCACTTATAGTTGTGGGTTCTAAAGATCATAGAAAGGCCAAATATGAAGATCACAAGACACTTCGTAGGTTGGCTCAGAATCGAGAGGCTGCAAGGAAGAGTCGATTAAGGAAAAAGGCATATGTACAACAATTAGAGAACAGCCGAGTCAAGCTTGCACAATTAGAGCAAGAGCTTCAGCGAGCACGCCAGCAGGGTATATTTATTGCAAATCCTGGGGATCATTGTCATCCGGTTGTTGGAAATGGTGCCTTAGCATTTGACATGGAGTATGCCTGCTGGGTTGAAGAGCATCAACGATTGCTCAACGACCTAAGATCTGCTATAAATTCTCAAATCGGCGACAGTGATTTACATCTTCTTGTTGACAGTGTCATGGCACATTATGATGAATTAGTTAGGTTGAAGAGCGTAGGTGAGAAGGCCGATGTATTCCACATGCATAGTGGAATGTGGAAGACGCCTGCAGAGAGATTGTTTATGTGGCTTGGTGGATTTCGTTCATCGGAACTTCTTAAGGTAGTTAAGAACCACCTTGAGCCGTTATCAGAACAACAGTTGGCGGGCATTGATAATCTGCAGGACTCTTTGCAACAGGCCGAGGATGCTTTATCTCAAGGCAAGGAAGCATTGCAACAATCTCTTATAGAGACACTTTCCTGCACCTCACTAGGATCCACTGGTACAGGAAATGTTGCTGATTACATGGGTCAAATGGCAATTGCGATGGGCAAGCTTGCCACACTAGAGAATTTCCTTCATCAGGCTGACCTCTTGAAGCAAGGTACTCTACAACAGCTGCAACGAATTTTGACTACGCGACAAGCAGCTCGTGCACTCATTGTTATAAACGATTACATTTCAAGACTACGAGCGCTTAGTTCATTATGGTTAGCACACCCTAGAGAATAA 1191 0.4391 MFSVKSSNIAIGGSNMQYGTLHANLGPSEIASTGEGCMDMYQKGIVMATLPMGNGHVENWGDSGIADNSQHTDDTSTDIDTDDKNQCNRTQHGALIVVGSKDHRKAKYEDHKTLRRLAQNREAARKSRLRKKAYVQQLENSRVKLAQLEQELQRARQQGIFIANPGDHCHPVVGNGALAFDMEYACWVEEHQRLLNDLRSAINSQIGDSDLHLLVDSVMAHYDELVRLKSVGEKADVFHMHSGMWKTPAERLFMWLGGFRSSELLKVVKNHLEPLSEQQLAGIDNLQDSLQQAEDALSQGKEALQQSLIETLSCTSLGSTGTGNVADYMGQMAIAMGKLATLENFLHQADLLKQGTLQQLQRILTTRQAARALIVINDYISRLRALSSLWLAHPRE* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0728 396 PANTHER TRANSCRIPTION FACTOR TGA9 1 396 - -
Lan11g0728 396 SMART brlzneu 108 171 IPR004827 GO:0003700|GO:0006355
Lan11g0728 396 Pfam bZIP transcription factor 111 149 IPR004827 GO:0003700|GO:0006355
Lan11g0728 396 Gene3D - 111 160 - -
Lan11g0728 396 MobiDBLite consensus disorder prediction 59 84 - -
Lan11g0728 396 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 110 154 IPR004827 GO:0003700|GO:0006355
Lan11g0728 396 Coils Coil 276 310 - -
Lan11g0728 396 CDD bZIP_HBP1b-like 112 163 - -
Lan11g0728 396 SUPERFAMILY Leucine zipper domain 112 154 IPR046347 GO:0003700|GO:0006355
Lan11g0728 396 Coils Coil 131 158 - -
Lan11g0728 396 ProSiteProfiles DOG1 domain profile. 177 393 IPR025422 GO:0006351|GO:0043565
Lan11g0728 396 Pfam Seed dormancy control 195 269 IPR025422 GO:0006351|GO:0043565
Lan11g0728 396 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 115 130 IPR004827 GO:0003700|GO:0006355
Lan11g0728 396 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0728 Lan-Chr11 6427041 6430740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0728 6 396 bZIP Transcription Factor Family AT1G68640 60.147 1.18e-154 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan11g0728 DOG1 2.7e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0728 K14431 - gmx:100777181 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0728 11 6427041 6430740 Lan2g0838 2 18487044 18491775 LSH
Lan11g0728 11 6427041 6430740 Lan9g0933 9 15658583 15662470 LSH