Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0721 ATGCAATTATTCGCTGAGACAATGCACCCCCAGAATATGGAGTTCCGTGACTATATCGAAGCATTGGAGGAAGAAAGAAAAAAAATTCAGGTCTTCAACAAAGAACTTCCTTTGTCCTTGGAGCTTGTCACGCGAGCCATTGAAGCGTGTAAGCAGCAATTATCTGGAACAACAACTGAGTATAATTTGAATGGGCTATCGGAGTGTTCGGAGCAGACATCAACAGAAGAAGGACCTGTTTTTGAGGAGTTCATTCCTATAAAGAGAAGGGCATCATCCCCTGATTATGACGATGATGATGAAGAACAACAACATTCTCATAAGCAGAAGATTCCAAAGGATAGCACTAATTCAGATTGGCTCAGATCTGTTCAGTTGTGGAATCCTGATCCCCCTTCTACAAAAGAGGATGTGCCTAGAAAAGCGTCTGTTGTGGAAGTGAAGAGGAATGGTGGTGGTGCCTTTCAACCATTTCATAGAGAGGAAAGTACTAATGGAAAGGCTAATGATGCATCAAATGATAAAGCACCCTCTTCGCCACAAGTACCTGCAACAAGTTCTACAGGACCAGTCACAAAAGACCATGTTGATGGAAGTAGTAATAAAGAGGAGAAAGGCCTGAGAAAACAGAGAAGGTCATGGTCACAAGAGTTGCATAAACGCTTCTTGCATGCCCTTCACCAACTTGGAGGTGCAGATTCTGCCACACCAAAACAGATTAGAGAGCTAATGAAGGTTGATGGCCTCACCAATGATGAAGTCAAAAGTCATTTACAGAAATTTCGTTTGCACAACAGAAGACCAAACTTAATGATTCACAAAAACAATACAAATTCACAAGCAGCTCCTTTGTTTCTTGTTGGTAACATTTTTGTTCAACCACAAGAATATGCTACTGCTATAGCTACATCATCAGGGGAATTGACCACAGTTACTGCACCAACTGGAATTTATGCACCTGTGGCTTCACATCCTCCAATTGTCACACACAAACCAGAAGCTTCAATTCAGAAGCTACAGTTTAAACAATTAGAGTTATCTGAACATTCAAATTCAGAAGAAAGGGCTAATCATAGTGAAGGTGCTGGTAATTCAAACTCTCCTACCTCATCATCCTCTACCCATATAACCACAACTTCACCTGCATGTTGA 1152 0.4123 MQLFAETMHPQNMEFRDYIEALEEERKKIQVFNKELPLSLELVTRAIEACKQQLSGTTTEYNLNGLSECSEQTSTEEGPVFEEFIPIKRRASSPDYDDDDEEQQHSHKQKIPKDSTNSDWLRSVQLWNPDPPSTKEDVPRKASVVEVKRNGGGAFQPFHREESTNGKANDASNDKAPSSPQVPATSSTGPVTKDHVDGSSNKEEKGLRKQRRSWSQELHKRFLHALHQLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLHNRRPNLMIHKNNTNSQAAPLFLVGNIFVQPQEYATAIATSSGELTTVTAPTGIYAPVASHPPIVTHKPEASIQKLQFKQLELSEHSNSEERANHSEGAGNSNSPTSSSSTHITTTSPAC* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0721 383 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 380 - -
Lan11g0721 383 MobiDBLite consensus disorder prediction 357 383 - -
Lan11g0721 383 MobiDBLite consensus disorder prediction 116 130 - -
Lan11g0721 383 MobiDBLite consensus disorder prediction 91 213 - -
Lan11g0721 383 MobiDBLite consensus disorder prediction 196 213 - -
Lan11g0721 383 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 209 264 IPR006447 GO:0003677
Lan11g0721 383 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 380 IPR044787 GO:0003700|GO:0006355
Lan11g0721 383 Coils Coil 15 35 - -
Lan11g0721 383 Pfam Myb-like DNA-binding domain 211 260 IPR001005 -
Lan11g0721 383 Gene3D - 208 266 - -
Lan11g0721 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 266 IPR017930 -
Lan11g0721 383 MobiDBLite consensus disorder prediction 91 115 - -
Lan11g0721 383 SUPERFAMILY Homeodomain-like 207 266 IPR009057 -
Lan11g0721 383 MobiDBLite consensus disorder prediction 346 383 - -
Lan11g0721 383 MobiDBLite consensus disorder prediction 169 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0721 Lan-Chr11 6377815 6380399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0721 3 338 G2-like Transcription Factor Family AT1G68670 45.352 1.13e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan11g0721 Myb_DNA-binding 4.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0721 - - adu:107491291 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0721 11 6377815 6380399 Lan9g0927 9 15582135 15584502 LSH