Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0720 ATGCAAACTCACTCTTTCTACATATCCTCCTCTAATGGAAGTAGCAGTAATAATAATGCATTCTTTGAAGCTGATGAAGTTCTTGATGATGAAGCTTCTATTTCCCTCTCTCTTGGCCTTCCTGGCCAACACAACAACCCCAAACCTTTCTCTATATCAAACCAATCTGATACCACTCTTCATCAACACCAAAACCCTACTACTTCTGATGATCACAGTGGTATAACAGTTGCCCTACACATTGGTCTTCCTTCCACTGCAGAAAACACAAACCCCACTATCACAAAACCTGATCATTTGATTTCAAATCCAATTCAGGGTCAGTATTGGATCCCTTCTCCTGCTCAAATCCTCATTGGACCCACCCAGTTTTCTTGCTCAGTCTGTAACAAAATGTTCAACCGTTTCAACAACATGCAGATGCATATGTGGGGACATGGGTCACAATACAGAAAAGGGCCTGAATCATTGAGAGGGATGAAACCAGCTTCTTCAATGCTGAGGCTACCTTGCTATTGTTGTGCTGAGGGTTGCAAGAATAACATAGATCACCCAAGGGCAAGACCATTGAAAGATTTCCGGACACTTCAGACACACTACAAGAGGAAGCATGGTACAAAGCCATTTGGGTGTAGAAAATGTGGGAAGCCATTTGCAGTGAGAGGGGATTGGAGGACACATGAGAAAAATTGTGGGAAGCTTTGGTTCTGTATTTGTGGTTCAGATTTCAAGCACAAAAGGTCCCTCAAAGACCATGTTCGTGCCTTTGGTGATGGCCATGCTCCTCATACTGTGGACAGTTGTAGTGATCAGAATATGATGGCAGATGATGATTTGTTATTAGGTGATGATGAAGATGATGAGGAGTTTGATGAAGATGAAGAAGATAGCAAC 894 0.4251 MQTHSFYISSSNGSSSNNNAFFEADEVLDDEASISLSLGLPGQHNNPKPFSISNQSDTTLHQHQNPTTSDDHSGITVALHIGLPSTAENTNPTITKPDHLISNPIQGQYWIPSPAQILIGPTQFSCSVCNKMFNRFNNMQMHMWGHGSQYRKGPESLRGMKPASSMLRLPCYCCAEGCKNNIDHPRARPLKDFRTLQTHYKRKHGTKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVDSCSDQNMMADDDLLLGDDEDDEEFDEDEEDSN 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0720 298 SUPERFAMILY beta-beta-alpha zinc fingers 193 229 IPR036236 -
Lan11g0720 298 MobiDBLite consensus disorder prediction 278 298 - -
Lan11g0720 298 ProSitePatterns Zinc finger C2H2 type domain signature. 126 146 IPR013087 -
Lan11g0720 298 MobiDBLite consensus disorder prediction 38 71 - -
Lan11g0720 298 Gene3D Classic Zinc Finger 166 256 - -
Lan11g0720 298 PANTHER ZINC FINGER PROTEIN WIP2 13 297 IPR043584 GO:0003700|GO:0010468
Lan11g0720 298 SUPERFAMILY beta-beta-alpha zinc fingers 117 146 IPR036236 -
Lan11g0720 298 ProSiteProfiles Zinc finger C2H2 type domain profile. 124 151 IPR013087 -
Lan11g0720 298 PANTHER ZINC FINGER PROTEIN WIP6 13 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0720 Lan-Chr11 6359428 6360963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0720 30 265 C2H2 Transcription Factor Family AT1G13290 72.803 1.77e-121 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan11g0720 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0720 - - aprc:113870355 442.965