Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0704 ATGAGGGGTGATGGCAAGGAAAGGAAGCAATTGCATCTGAGCAATATCTACTCATTCACGTGTGGCAAACAATCTTTCAAGGGAGATCATTCGCAGATCGGAGGGCGCGGCTATTCGAGGGTGGTGTTCTGCAATGATCTAGATAACTTTGAAGTTTGGCTTAGGGACTATGCAGATAATGCTGTGAGGTCTACTAAGTATACCATTGCTACCTTCTTGCCCAAGTCACTGTTTGAGCAGTTTAGGAGAGTAGCTAATTTCTATTTCTTGGTGACCGGAATCTTGTCCTTCACAGAACTTGCTCCTTATACAGCTGGAAGTGCTATTCTTCCTTTGATTGTTGTTATTGGAGCAACTATGATCAAAGAGGGTATTGAAGATTGGCGTAGGAAAAAACAGGATATTGAAGTGAACAATAGAAGAGTTAAAGTGCATAAAGGGGATGGAACTTTTGAATATACCGAGTGGAAGAATCTGAGGGTGGGGCATATAGTAAAGATTGAGAAGGATGAATTCTTCCCTGCTGATCTCCTGCTGCTATCATCTAGCTATGAGGATGCAGTCTGCTATGTCGAAACAATGAACTTGGACGGGGAAACAAATTTGAAGCTGAAACAAGGGTTGGATGTAACTTGTTCCTTACACGAGGACTTCAAGTTCCGTGATTTCAAGGCTACAATTAAATGTGAAGACCCAAATGCAAATTTGTATTCATTTATTGGGAGCATAGAGTTTGAAGAGAAACAATATCCCCTTTCTCTTCAGCAACTTCTTCTGAGAGACTCAAAACTTCGTAACACAGATTATGTATTCGGAGCTGTTGTCTTCACTGGTCATGATACGAAGGTTATTCAAAATTCTACCGATCCTCCTTCGAAGAGAAGCAAAGTTGAGAGGAAGATGGATAGAGTTATCTACTTCTTGTTTTGTATTTTATTTCTAATGGCAGTTGCTGGATCTATTTTCTTTGGTGTTATAACTAAAGATGACTTGGACAATGGTATGATGAAAAGGTGGTATCTCAGACCAGATGATTCTACAATTTTCTTTGACCCTAAAAGAGCACCAGCTGCTGCATTATATCATTGTTTGACAGCGTTGATGTTATACGGCTTCTTTATTCCGATATCCTTGTATGTATCAATAGAATTTGTCAAAGTACTTCAGAGCATCTTCATCAATCAAGATATCCATATGTACTATGAAGAAGCGGACAAACCAGCTCATGCCCGTACTTCAAACTTGAATGAGGAACTTGGCCAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTGACATGCAACTCAATGGAATTCATCAAATGTTCCATTGCTGGGGTAGCTTATGGTCGCGGTGTTACAGAAGTTGAGAGGGCCATGAATAGAAGAAATGGTTCACATGTGATAGACGAGAATGTTAGTCTATCAGAATCAGGTGATTTAAAGCAATCTCCTGATAATAGAGCACGTGTCAAAGGTTTCAACTTTACTGATGAAAGGATAATGAACGGAAACTGGGTTAATGAGCCTTATGCAGGTGTTATCCAGAAATTTTTTCGCTTATTGGCAATCTGTCATACAGCCATGCCAGAAGTACATGAAGATACAGGAAATGTCTCATATGAGGCTGAATCTCCAGATGAAGCAGCATTTGTGATTGCAGCGAGAGAAGTTGGTTTTGAATTCTTTAAAAGGACTCAGACTAGTTTAACAATGTATGAGTTGGATCCAGTTTCTGGCAACAAAGTTGAAAGGATGTACAAGCTTCTCAATGTTTTAGAATTTAATAGCTCAAGGAAGCGCATGTCAGTGATAGTGAAAGATGAAGAAGGGAGAATTTTGCTACTCTGTAAAGGTGCTGATAGTGTAATGTTTGAAAGGCTTAGGAAGAATGGGAGGGAGTTCGAAGAGAACACATTGGAGCACGTGCACGAGTATGCTGATGCAGGTCTGAGGACCCTGATATTGGCATATCGTGAGCTCAATAAAGAAGAATACAAGGAGTTTTATAATAAAATTTCTGATGCAAAAAAATCAGTCAGTGCAGATCAGCAAAGTCTAATTGAGGAAGTGTCAGATAAGATTGAGAGGGATTTGATTCTTCTTGGTGCAACTGCTGTCGAGGACAAGCTCCAAAATGGGGTTCCTAATTGCATTGACAAGCTTGCCCAAGCTGGAATTAAGATCTGGATTTTGACCGGGGATAAAATGGAGACTGCCATCAATGTTGGTTATGCTTGTAGTTTGCTTAGACAAGGAATGAAGCAGATTATAATTCATTTGGAGACTCCTGAAATTCAAGCAGTGGAGAAGCTCCGAGACAAGAGGGCTATTGCCAAGGCTTCAAGGGAAAGTGTTCACAATCAGATATATGAAGGCGCACAGCAAGTTATTGCCTCCAGAAGAACCTCTGACCAAGCATTTGCTCTGATTATTGATGGAAAATCACTTGCTTATGCTCTGGACGATGATATGAAGAACATGTTTCTAGACCTTGCTGTTCGTTGTGCATCTGTTATCTGCTGCCGCACGTCGCCAAAGCAGAAGGCACTGGTCACTAGACTGGTCAAATCTGGAACTAGGAAAATTACTTTAGCTATTGGTGACGGAGCAAATGATGTGGGAATGCTTCAAGAAGCAGATATAGGGGTTGGAATTAGTGGTGTTGAAGGAATGCAGGCTGTTATGTCTAGCGATATTGCAATTGCACAGTTCCGTTATTTGGAACGTTTGCTTCTTGTACATGGACATTGGTGTTACCGAAGGATTTCGTCAATGATATGCTATTTTTTCTACAAGAATGTCACATTTGGCTTTACTGTATTCTTATATGAGGTGTATGCATCGTTCTCTGGGCAGCCTGCATACAATGACTGGTTTTTGTCTCTCTATAATGTCTTCTTTTCATCACTGCCGGTGATTGCCCTTGGGGTTTTTGACCAGGATGTATCTGCCCGGTACTGTCTGAAGTTTCCTATGTTATATCAAGAAGGTGTCCAAAATATCCTCTTTAGCTGGCGACGAATTCTCACCTGGATGCTTAATGGGTTTATCAGTGCCATAATAATTTTCTTCTTCTGCACAAAAGCAATGGAGATTCAGGCCTTTGATGATAAGGGAAGAACCGCAGAGAGGGATATACTTGGAGCAACAATGTATACTTGTGTGGTTTGGGTTGTAAACTTGCAGATGGGACTTGCTATAAGTTACTTCACCTTGATTCAACATATTTTCCTCTGGGGCTCCATTGCTCTCTGGTATTTTTTCCTCATCGTGTACGGAACAATGACTCCGACCTTTTCTACAATTGCTTACAAAGTATTCATCGAATGTCTCGCTCCGGCTCCTTCCTATTGGATTGTGATTTTTTGTGTGGTTATCTCAACACTCACACCATACTTCTCTTTCTCAGCAATTCAGATGCAGTTCTTTCCTACCTATCACGAAATGGTACAATGGATAAGGTATGAGGGGAAGACAGATGATCCAGAATTATGTGAAATGTTGGTTCAACAGCGCGCATAG 3528 0.407 MRGDGKERKQLHLSNIYSFTCGKQSFKGDHSQIGGRGYSRVVFCNDLDNFEVWLRDYADNAVRSTKYTIATFLPKSLFEQFRRVANFYFLVTGILSFTELAPYTAGSAILPLIVVIGATMIKEGIEDWRRKKQDIEVNNRRVKVHKGDGTFEYTEWKNLRVGHIVKIEKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLDVTCSLHEDFKFRDFKATIKCEDPNANLYSFIGSIEFEEKQYPLSLQQLLLRDSKLRNTDYVFGAVVFTGHDTKVIQNSTDPPSKRSKVERKMDRVIYFLFCILFLMAVAGSIFFGVITKDDLDNGMMKRWYLRPDDSTIFFDPKRAPAAALYHCLTALMLYGFFIPISLYVSIEFVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERAMNRRNGSHVIDENVSLSESGDLKQSPDNRARVKGFNFTDERIMNGNWVNEPYAGVIQKFFRLLAICHTAMPEVHEDTGNVSYEAESPDEAAFVIAAREVGFEFFKRTQTSLTMYELDPVSGNKVERMYKLLNVLEFNSSRKRMSVIVKDEEGRILLLCKGADSVMFERLRKNGREFEENTLEHVHEYADAGLRTLILAYRELNKEEYKEFYNKISDAKKSVSADQQSLIEEVSDKIERDLILLGATAVEDKLQNGVPNCIDKLAQAGIKIWILTGDKMETAINVGYACSLLRQGMKQIIIHLETPEIQAVEKLRDKRAIAKASRESVHNQIYEGAQQVIASRRTSDQAFALIIDGKSLAYALDDDMKNMFLDLAVRCASVICCRTSPKQKALVTRLVKSGTRKITLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNVTFGFTVFLYEVYASFSGQPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPMLYQEGVQNILFSWRRILTWMLNGFISAIIIFFFCTKAMEIQAFDDKGRTAERDILGATMYTCVVWVVNLQMGLAISYFTLIQHIFLWGSIALWYFFLIVYGTMTPTFSTIAYKVFIECLAPAPSYWIVIFCVVISTLTPYFSFSAIQMQFFPTYHEMVQWIRYEGKTDDPELCEMLVQQRA* 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0704 1175 CDD P-type_ATPase_APLT_Dnf-like 59 1017 - -
Lan11g0704 1175 Pfam Phospholipid-translocating ATPase N-terminal 54 104 IPR032631 -
Lan11g0704 1175 SUPERFAMILY Calcium ATPase, transduction domain A 142 285 IPR008250 -
Lan11g0704 1175 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Lan11g0704 1175 PRINTS P-type cation-transporting ATPase superfamily signature 868 887 - -
Lan11g0704 1175 SFLD p-type atpase 408 919 IPR044492 -
Lan11g0704 1175 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 1146 IPR023298 -
Lan11g0704 1175 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1153 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lan11g0704 1175 Pfam Phospholipid-translocating P-type ATPase C-terminal 896 1147 IPR032630 -
Lan11g0704 1175 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 840 950 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan11g0704 1175 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 5 1172 - -
Lan11g0704 1175 Pfam Cation transport ATPase (P-type) 536 629 - -
Lan11g0704 1175 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Lan11g0704 1175 Gene3D - 118 288 - -
Lan11g0704 1175 SUPERFAMILY HAD-like 421 923 IPR036412 -
Lan11g0704 1175 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 433 705 IPR023299 GO:0000166
Lan11g0704 1175 Gene3D - 544 703 IPR023299 GO:0000166
Lan11g0704 1175 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 5 1172 - -
Lan11g0704 1175 SFLD Haloacid Dehalogenase 408 919 - -
Lan11g0704 1175 Gene3D - 704 908 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0704 Lan-Chr11 6084244 6091767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0704 11 1175 Primary Pumps ATPases AT1G68710 72.887 0.0 1840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0704 K01530 - gmx:100785037 2001.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0704 11 6084244 6091767 Lan9g0913 9 15289752 15297783 LSH