Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0703 ATGTCAGCGGCATCGCCGTCTTCGGCATCTTCCACCGCCGCACCACCACCTACCACCACAACTCCATCACAATCTTCCCTTGCACCTAACACTTCAATTTCAACCCCACCGCCATCTCAGTCTCCTCCTCCGGCAACCCCATCGGCTCCTCCTCCCGCAGTGTCTCCACCGGCCCCACCATCACAGCCGCCCCAAGCTTCACCTCCCCCACCTTTAGTATCTCCTCCTCCAACCTCACCATCAGCCCCTCCTCCGATATCACCACCACCAGCACCTCCATCTTCTCCGGTACCGCCATCACCAGTCCCACCAGGAAATTCTCCACCACCATCAAGCCCACTTAACAACTCATCATCGCCACCAGAGAGTTTATCCCCTCCTCCGACCACTGCACCGCCAGCCCAAGGTTCTCCGCCACCTACACAATCCGTGCCACCACAACCATCATCACCACCATCACCAACTTCCACCCCTAATTCGCCTCCCCCTCCATCACCCACGATTCGGTTGTCACCACCTCCGCCCTTGCTCGTTACGCCACCACCGTCACAAAATGGATCAAAGAACTCAAGCCCTGGACCTGGTAGTAGTAGTGGAAAAGGAATTAGTACTGCAGGTATAGTTGCTATTGGTGTTGTGGCTGGATTTTTCTTACTTGGCTTCATTGGAGTTGCTATATGGTGCATTAGGAGGCAAAAGAAAAAAGGGCCACAAAATGGTGGTTATGTCATGCCATCCACTCTTCCCTCTTCACCTGAATCAGATTCATCATGTTTTAAGACACATTCTTCAGCTCCTCCTGTACAAAGTGGCTCTGGCAGTGATGTTGTGTATACACCACCATCTGAGCCTGGTGGACTAGGAAACTCTAGGTCATTGTTTTCATATGAAGAGCTAATCAAGGCAACAAATGGTTTCTCAAGTCAAAATCTTTTGGGCGAGGGAGGATTCGGTTCTGTATATAAAGGATACCTACCTGATGGGAGAGAGATAGCAGTGAAGCAGTTGAAAATTGGTGGAGGTCAAGGAGAGAGAGAATTCAAAGCTGAAGTTGAAATTATTAGTCGCATACATCATCGCCATTTGGTTTCTTTAGTCGGATACTGCATTCAAGATGACAGAAGACTGCTTGTCTATGACTATGTCCCTAACAATAATCTTTATTTTCATCTGCATGAGGAAGGTAGGTCTGTGCTAGGTTGGGAAAATCGTGTTAAGATCGCAGCTGGTGCAGCTCGAGGAATAGCTTATCTCCATGAAGACTGTAATCCTCGGGTTATTCACAGGGATATCAAGTCATCAAACATTCTTTTAGATTACAATTTTGATGCTCAAGTTTCAGATTTTGGCCTAGCCAAATTAGCTCTTGATGCAAATACACATGTAACCACACGAGTCATGGGAACTTTTGGGTATGTTGCTCCTGAATATGCATCAAGCGGAAAATTGACTGAGAAGTCTGATGTATATTCTTTTGGAGTCGTGCTTTTGGAACTCATTACCGGAAGAAAGTCAGTAGATACATCTCAACCCATGGGAGATGAAAGTCTAGTTGAATGGGCTCGACCTTTGCTGAGTCATGCACTTGATAATGAGGGTTATGATAGTTTGGCAGATCCAAGGCTAGAAAAGAACTATGTTGAAAGTGAAATGTTTTGCTTGATTGAAATTGCTGCTGCTTGTGTGCGGCATTCGGCTGCAAAGAGACCTCGCATGGGACAGGTTGTTAGAGCTTTCGATAGCTTAGCAGGTTCAGATCTAACAAACGGAATGCGGGTTGGAGAAAGCGAGGCGTTTAACTCTGCGCAACAATCTGCCCAAATAAGATTATTTCGAAGGATGGCATTTGGTAGTCAAAATTACAGCTCAGACTTTTTTAGCCAGGATAGTTTGAATGCTTGA 1902 0.4679 MSAASPSSASSTAAPPPTTTTPSQSSLAPNTSISTPPPSQSPPPATPSAPPPAVSPPAPPSQPPQASPPPPLVSPPPTSPSAPPPISPPPAPPSSPVPPSPVPPGNSPPPSSPLNNSSSPPESLSPPPTTAPPAQGSPPPTQSVPPQPSSPPSPTSTPNSPPPPSPTIRLSPPPPLLVTPPPSQNGSKNSSPGPGSSSGKGISTAGIVAIGVVAGFFLLGFIGVAIWCIRRQKKKGPQNGGYVMPSTLPSSPESDSSCFKTHSSAPPVQSGSGSDVVYTPPSEPGGLGNSRSLFSYEELIKATNGFSSQNLLGEGGFGSVYKGYLPDGREIAVKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIQDDRRLLVYDYVPNNNLYFHLHEEGRSVLGWENRVKIAAGAARGIAYLHEDCNPRVIHRDIKSSNILLDYNFDAQVSDFGLAKLALDANTHVTTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKSVDTSQPMGDESLVEWARPLLSHALDNEGYDSLADPRLEKNYVESEMFCLIEIAAACVRHSAAKRPRMGQVVRAFDSLAGSDLTNGMRVGESEAFNSAQQSAQIRLFRRMAFGSQNYSSDFFSQDSLNA* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0703 633 MobiDBLite consensus disorder prediction 1 200 - -
Lan11g0703 633 MobiDBLite consensus disorder prediction 243 275 - -
Lan11g0703 633 CDD STKc_IRAK 312 582 - -
Lan11g0703 633 PRINTS Proline rich extensin signature 6 27 - -
Lan11g0703 633 PRINTS Proline rich extensin signature 29 45 - -
Lan11g0703 633 PRINTS Proline rich extensin signature 46 63 - -
Lan11g0703 633 PRINTS Proline rich extensin signature 64 89 - -
Lan11g0703 633 PANTHER BNACNNG34790D PROTEIN 14 630 - -
Lan11g0703 633 SUPERFAMILY Protein kinase-like (PK-like) 288 577 IPR011009 -
Lan11g0703 633 Gene3D Phosphorylase Kinase; domain 1 286 381 - -
Lan11g0703 633 SMART serkin_6 306 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0703 633 MobiDBLite consensus disorder prediction 35 181 - -
Lan11g0703 633 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 14 630 - -
Lan11g0703 633 ProSiteProfiles Protein kinase domain profile. 306 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0703 633 MobiDBLite consensus disorder prediction 182 200 - -
Lan11g0703 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Lan11g0703 633 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Lan11g0703 633 Gene3D Transferase(Phosphotransferase) domain 1 382 597 - -
Lan11g0703 633 Pfam Protein tyrosine and serine/threonine kinase 309 577 IPR001245 GO:0004672|GO:0006468
Lan11g0703 633 MobiDBLite consensus disorder prediction 235 275 - -
Lan11g0703 633 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0703 Lan-Chr11 6077610 6081793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0703 93 628 Trihelix Transcription Factor Family AT5G38560 56.273 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lan11g0703 PK_Tyr_Ser-Thr 4.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0703 - - gmx:100794393 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0703 11 6077610 6081793 Lan2g0091 2 824990 829489 LSH