Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0678 ATGGGAAACAAGGAGGAAGAGAAATCCGTGAAGACTGAAAAGCCTTCTTCACTGGGTCAGGCTAATCAGGCCAACCAGCCTGGTGTTCATGTCTATCCCGATTGGGCTGCCATGCAGGCATATTATGGCCCAAGATTCAGCATGCCACCATATTATAACCCGGATATGGCTTCTGGTCATGCTCCTCACCCATACATGTGGGCTCCACAGCCTATGATGTCACCATATGGGCCCCCTTATGCAGCAATTTATCCTCATGGAGGGGTTTATACTCACCCTGCGGTTGCTATGGGGCCACATTCACATGGCCAAGGCGTTTCATCTTCACCTGCTGCTGGAACTCCTTCAAGCATTGAGACACCAACCAAATTTTCCGGAAATACTGATAAGGGTTTAATGAAGAAACTGAAAGGGTTTGATGGGCTTGCAATGTCAATAGGAAATGACAATGCTGGGAGTGCAGGACGTGGAGCTGAAAACAGGCTGTCACAAAGTGTGGATACTGAGGGTTCGAGTGATGGAAGTGATGGCAACACTTCTGGGGCTAATCAATCAAGGAAAAGAAGCCGTGAGGAAACACCAACCACTGATGGAGAAGGAAAAACTGAGATGCAAGATAATCCAGTTTCCAAAGAAACTCCTTCCCTTAAGGTGATGCCAGTTACGCCAACCAGTTTTGCAGGAAAATTAGTTGGACCCACAGTTTCTTCAGGTATGACCACGGCACTGGAGCTGAGGAACCCTTCAGCTGTTAATTTTAAGGCAAATTCCACAAGAGCCCCACAGCCTTGTGAAGTTTTGCCTCTTGAAGCTTGTTTACAGAATGAGCGTGAACTGAAACGTGAGAGGAGGAAACAATCAAACCGTGAATCTGCTAGAAGGTCCAGACTAAGGAAGCAGGCTGAGGCTGAAGAGTTAGCTCGAAAAGTTGATAACTTGACTGCTGAGAATGTATCACTGAAATCAGAAATAAATCATCTGGCTGAAAGTTCTGAGAAACTGAGGGTGGAAAATGCTACAATGATGGAAAAACTGAAAAATGTTCAAGTGGGGCAAGCAGATGAGATCATTTTGAACAGCAATAACATCCAGAGGACAATACCTATAAGTACAGAAAACTTACTATCAAGAGTTAATAATTCGGGTTCCGACGATAGAACTGCAACGGAGGATGAGAATGATTTTGGTGAGAACAAACCTAAATCTGGGGCCAAGCTGTATCAACTACTGGATAATCGTAGACCTAATGCTGTTGCAGCTGGTTAA 1266 0.451 MGNKEEEKSVKTEKPSSLGQANQANQPGVHVYPDWAAMQAYYGPRFSMPPYYNPDMASGHAPHPYMWAPQPMMSPYGPPYAAIYPHGGVYTHPAVAMGPHSHGQGVSSSPAAGTPSSIETPTKFSGNTDKGLMKKLKGFDGLAMSIGNDNAGSAGRGAENRLSQSVDTEGSSDGSDGNTSGANQSRKRSREETPTTDGEGKTEMQDNPVSKETPSLKVMPVTPTSFAGKLVGPTVSSGMTTALELRNPSAVNFKANSTRAPQPCEVLPLEACLQNERELKRERRKQSNRESARRSRLRKQAEAEELARKVDNLTAENVSLKSEINHLAESSEKLRVENATMMEKLKNVQVGQADEIILNSNNIQRTIPISTENLLSRVNNSGSDDRTATEDENDFGENKPKSGAKLYQLLDNRRPNAVAAG* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0678 421 MobiDBLite consensus disorder prediction 384 399 - -
Lan11g0678 421 SUPERFAMILY Leucine zipper domain 279 334 IPR046347 GO:0003700|GO:0006355
Lan11g0678 421 Pfam bZIP transcription factor 276 338 IPR004827 GO:0003700|GO:0006355
Lan11g0678 421 MobiDBLite consensus disorder prediction 378 421 - -
Lan11g0678 421 CDD bZIP_plant_GBF1 281 329 IPR045314 GO:0003700|GO:0006355
Lan11g0678 421 Pfam Disordered region downstream of MFMR 129 255 - -
Lan11g0678 421 MobiDBLite consensus disorder prediction 200 220 - -
Lan11g0678 421 MobiDBLite consensus disorder prediction 102 127 - -
Lan11g0678 421 MobiDBLite consensus disorder prediction 157 184 - -
Lan11g0678 421 MobiDBLite consensus disorder prediction 99 130 - -
Lan11g0678 421 Coils Coil 269 330 - -
Lan11g0678 421 PANTHER G-BOX-BINDING FACTOR 3 1 421 - -
Lan11g0678 421 Gene3D - 279 333 - -
Lan11g0678 421 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 278 341 IPR004827 GO:0003700|GO:0006355
Lan11g0678 421 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 421 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lan11g0678 421 MobiDBLite consensus disorder prediction 279 300 - -
Lan11g0678 421 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 283 298 IPR004827 GO:0003700|GO:0006355
Lan11g0678 421 Pfam G-box binding protein MFMR 1 95 IPR012900 -
Lan11g0678 421 SMART brlzneu 276 340 IPR004827 GO:0003700|GO:0006355
Lan11g0678 421 MobiDBLite consensus disorder prediction 185 199 - -
Lan11g0678 421 MobiDBLite consensus disorder prediction 150 221 - -
Lan11g0678 421 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0678 Lan-Chr11 5705715 5711464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0678 1 421 bZIP Transcription Factor Family AT2G46270 49.415 3.36e-111 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan11g0678 MFMR_assoc 1.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0678 K09060 - gmx:778133 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0678 11 5705715 5711464 Lan11g0678 11 5705715 5711464 ECH
Lan11g0678 11 5705715 5711464 Lan9g0956 9 16083257 16089298 LSH
Lan16g1255 16 20581524 20587166 Lan11g0678 11 5705715 5711464 PCT
Lan11g0678 11 5705715 5711464 Lan16g1255 16 20581524 20587166 PCT