Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0662 ATGGAAAGTCACTTGAAGTTGGAAGAAGCTGATCTCATCAGTGACCTAATGCAAGGGAAGGAACTTACAAAGCAGCTACATGATCATATGTTCTCATCTTCATCATCTCATGAAACCAAAGAAGTTTTACTTGAGAGAATACTTTTGTCCTATGACAAAGCACTCACCAAACTAAAGTGGGAGGCTAATGTAGGAAATGGAGAAACTAAGATTACCAATGGCAACATGATGGGTTCTCCTTGTTCTTTTACAAATGAGAATCCCAAAACTGAGGTTTTTGACCAAGTGGTTAAGCATAGAAGTGTCTCAAAGAGAAGAAAGACCATGGACATTTGGAAAAAACAAGTGAAGGTGTGCTTAGGAGCAGTGATTGAGAGGTCTCTGGATGATGGCAATAGCTGGAGAAAATATGGACAGAAGGATATCCTTAGAGCAAACTTTCCTAGAGAATATTACAGATGTACACATAAACATACACAAGGGTGTCTAGCCACAAAACATGTGCAAAAATCAGATGAAGAACCAACAACATATGAAATAACCTACAAAGGAAGACACACATGCATCCAAGCTAATCATGCAAACAAGGCATTCTCATCAAGAGCAAAGATTTGCTTGGGAGAACATAAACACCACAACCACCAAAAGAATGAAGCACAAGAAGAGAAAATAGAACAACCACCCCATGAGACAATTTTCACTTTTAGTTCAGAGCTTGAAGTTAAAATAGAGGACTTGAAAACCAAGAAAAATATCTTCCCATCATTCTGTTTTCCTTCTCCATCAATAGGATCAGAAATTGAAGACAACAACATATTCTCTGACACACTGATCGAAAACCCTTTCATGGAATGTTTTTCTCCTGCATTCTTATCACCTGCCACTTCAGAATCAAACATTTTCTGTTTATCACCATGCCACTTTGGAAGCAGTGGACTAGGCCTAAGTGTGCAAACATCAGAATCTGATATCACTGATGTAGTGTCAGCCACAACTTCAATCACCAATTCACCAATAGTAAACTTGGATGAGTTGAATCTCTTCCTTGATAATGTGGATTTTGACACTTTCCCTATGCACCCCTGA 1086 0.3858 MESHLKLEEADLISDLMQGKELTKQLHDHMFSSSSSHETKEVLLERILLSYDKALTKLKWEANVGNGETKITNGNMMGSPCSFTNENPKTEVFDQVVKHRSVSKRRKTMDIWKKQVKVCLGAVIERSLDDGNSWRKYGQKDILRANFPREYYRCTHKHTQGCLATKHVQKSDEEPTTYEITYKGRHTCIQANHANKAFSSRAKICLGEHKHHNHQKNEAQEEKIEQPPHETIFTFSSELEVKIEDLKTKKNIFPSFCFPSPSIGSEIEDNNIFSDTLIENPFMECFSPAFLSPATSESNIFCLSPCHFGSSGLGLSVQTSESDITDVVSATTSITNSPIVNLDELNLFLDNVDFDTFPMHP* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0662 361 SMART WRKY_cls 128 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g0662 361 Pfam WRKY DNA -binding domain 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g0662 361 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 356 IPR044810 GO:0003700
Lan11g0662 361 ProSiteProfiles WRKY domain profile. 128 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g0662 361 SUPERFAMILY WRKY DNA-binding domain 127 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan11g0662 361 Gene3D WRKY domain 118 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan11g0662 361 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0662 Lan-Chr11 5539651 5542711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0662 13 191 WRKY Transcription Factor Family AT5G24110 43.169 1.97e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan11g0662 WRKY 8.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0662 - - aprc:113849885 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0662 11 5539651 5542711 Lan11g0662 11 5539651 5542711 ECH
Lan11g0662 11 5539651 5542711 Lan9g0974 9 16398543 16413361 LSH