Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0621 ATGGAAGATTTGATCATATCTCCTTCTTCTTCCTCCACCCTTGTCTCATTCCCCAAAGAAACCCCACCAGCCCTTCAACAAAAGCTTCAATCTCTAGTAGAGACTCAACCTGATTGGTGGGTCTATTCCATTTTTTGGCAGACCAAAAAAGATGACAATGGCAACCTTTACTTATCTTGGGGTGAAGGCCATTTTCAAGGCACAAAAGAAACTTCCCCAACACTACTACTACAAGAAGAAGATGAAGAGCTTTCCAACAAGGACCAAAACGATGCTGAATGGTTCTATATCATGTCCTTGGCTCGTACCTTTTCCATCACCAATGCTTCTTCACCTTCATCTTCATTGTCCTCACTACCTGGTAAGTCGTTTGCTTTAGGCTCAGTGCTTTGGCTGAACAATAAGCACGAGCTTCAATACTACAATTGTGAGAGAACCAAAGAGGCTCATATGCATGGAATCGAAACCTTAACTTGCATCCCAACAACTAATGGGGTAATCGAATTAGGTTCCTACGACACCATCAAACAAAATTGGGGTGTTGTTCAACATGCTAAATCCCTCTTTGAATCTTCATCATATTTTATGGACAAAGACAAAAATCACTTTAGCCCGACACAAACACAATTCTTCGACGACCAAAACTTCTCCTTTGCCGACATAGTGGGACGCATGGGTGTTCAAGAAAATGAAGACAGTATAAAGAGAAATGCAAATGTACAAGAACATTCCAACAAGATGGACGTTCAATCATCTTATGTTGATTCTGAGAATTCAGATTACGACAATTATCCAATATTGGCAGTGGAAAACACATCAGAGAAGAAGAAAGGTTTGTCACTGCCTAATAAAAGAGGGAGAAAATCACTGCATGTGAGCGAAACAGCGGTGAATAATCATGTCCATGCAGAGAGGCAAAGAAGGAAGAAATTAAACCATCGATTCTACGCGTTGAGAGCGGTGGTGCCAAATGTTTCAAGAATGGATAAGGCTTCTCTTTTATCAGATGCTGTTGCTTACATCAATGAGCTCAAAACAATGATTGAAGATTTAAAGAAGGATCATTGTAGCAATAAGAAGTCGAAGGCGGAAAAAATGGAGAATAATATTGCCACAACAACTAATTCAACTGTGGTGGACCAAACGGGGCCTAATAATAATAATTTTGGGCTTGAGGTTGATGTGAAGATGGTAGGGAATGACGCCATTGTGAGGGTTCAATCGGAGAATGTAAACCACCCTGGAGCAAGGATAATGGGTTTGTTTAGGGACTTGAATTTTCAGGTACATCATGCTAGCATGTCTTGTGTTAATGATCTTATGCTTCAATATTTTGTTACTAAGGCTCCTAATTGGATGAGAAGTGAAGAGGTTCTTAAGTCTACAATTCTCATGAGTTTGAATCTCTAG 1410 0.4007 MEDLIISPSSSSTLVSFPKETPPALQQKLQSLVETQPDWWVYSIFWQTKKDDNGNLYLSWGEGHFQGTKETSPTLLLQEEDEELSNKDQNDAEWFYIMSLARTFSITNASSPSSSLSSLPGKSFALGSVLWLNNKHELQYYNCERTKEAHMHGIETLTCIPTTNGVIELGSYDTIKQNWGVVQHAKSLFESSSYFMDKDKNHFSPTQTQFFDDQNFSFADIVGRMGVQENEDSIKRNANVQEHSNKMDVQSSYVDSENSDYDNYPILAVENTSEKKKGLSLPNKRGRKSLHVSETAVNNHVHAERQRRKKLNHRFYALRAVVPNVSRMDKASLLSDAVAYINELKTMIEDLKKDHCSNKKSKAEKMENNIATTTNSTVVDQTGPNNNNFGLEVDVKMVGNDAIVRVQSENVNHPGARIMGLFRDLNFQVHHASMSCVNDLMLQYFVTKAPNWMRSEEVLKSTILMSLNL* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0621 469 Gene3D - 293 377 IPR036638 GO:0046983
Lan11g0621 469 PANTHER TRANSCRIPTION FACTOR BHLH14 1 467 - -
Lan11g0621 469 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 295 344 IPR011598 GO:0046983
Lan11g0621 469 PANTHER MYC 1 467 IPR045084 GO:0003700|GO:0006355
Lan11g0621 469 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 296 356 IPR036638 GO:0046983
Lan11g0621 469 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 25 189 IPR025610 -
Lan11g0621 469 SMART finulus 301 350 IPR011598 GO:0046983
Lan11g0621 469 Pfam Helix-loop-helix DNA-binding domain 299 344 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0621 Lan-Chr11 5033306 5034822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0621 21 469 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00870 36.876 1.74e-73 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan11g0621 bHLH-MYC_N 1.5e-44 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0621 - K13422 lang:109359482 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0621 11 5033306 5034822 Lan9g1000 9 16934282 16936130 LSH