Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0619 ATGACCACGAAGGCACCGAGACCTCGTATCCGTGTAGGGAAGTATGAGCTGGGAAAAACCATTGGCGAAGGAAGCTTTGCAAAGGTTAAGTTAGCAAGGAACGTTGATACTCGTGACCATGTTGCTATCAAAATCCTTGACCGTGAACATGTTCTCCGCCATAATATGATGGAACAGCTGAAGAAAGAAATTTCAGCGATGAAGCTTATCAATCATCCAAACGTTGTAAAAATATTTGAGGTGATGGCAAGCAAAACAAAGATCTACATTGTACTGGAGTTGGTTAGGGGAGGAGAACTATTTGACAAAATTGCAAGTAGTGGCAAACTAAAAGAGGATGAAGCAAGAAGTTATTTCCAACAACTAATCAATGCAGTTGATTACTGCCATAGTAGAGGCGTGTATCACCGAGATTTGAAGCCTGAGAATCTTCTTCTGGACACAAATGGTGTTCTTAAAGTTTCGGATTTTGGATTGAGTACTTATGCGCAACAAGAGGATGAACTCCTCCGCACTGCTTGTGGAACACCAAATTATGTTGCTCCTGAGGTGCTTAGGGATAGAGGTTATGTTGGTTCTGCATCTGATATCTGGTCATGTGGAGTCATTCTCTTTGTACTAATGGCTGGGTACTTGCCTTTTGATGAACCAAATCATGCGGCACTGTTTCGGAAAATTAGCAGAGCTGATTTCAGTTTTCCATCTTGGTTTGCGCCCGAGTCAAAGAAACTGCTGAAGCGTATTCTTAACCCAGACCCTCTCGCAAGGATAAAAATAGAAGAGCTCTTAGAGGATGAATGGTTCAAGAAAGGATACAAGCCAGCATCTTTTACAGAGGAAGAGGGTGTAAATGTTGATGATGTAGCGGCTGCTTTCAATGATTCTAAGGAAAATCTCGTGACAGAGAGAAAAGAAAAACCAGTCTCAATGAATGCTTTCGAGCTCATTTCTAGGTCACAAGGCTTCAATCTTGACAGTTTGTTTGAGAAGCAGACAGGGGTTGTAAAGCGGGAAACACATTTTACTTCACAGCGTCCTGCAAATGAAATTATGTCAAAAATTGAGGAAGCTGCCAAACCTCTGGGCTTCAATGTTCACAAGCGAGATTATAAGATGAAGCTGCAGGGTGATAAGAGCGGAAGGAAGGGTCACCTTTCGGTGGCTACTGAGGTTTTTGAAGTGGCTCCCTCCTTGCACATGGTGGAGCTGCGAAAGACAGGTGGCGATACACTAGAGTTTCACAAGTTTTACAAGAACTTCTCATCTGGGTTGCAAGACATCGTGTGGAACGCTGAAGAGAAAAAATGA 1308 0.4281 MTTKAPRPRIRVGKYELGKTIGEGSFAKVKLARNVDTRDHVAIKILDREHVLRHNMMEQLKKEISAMKLINHPNVVKIFEVMASKTKIYIVLELVRGGELFDKIASSGKLKEDEARSYFQQLINAVDYCHSRGVYHRDLKPENLLLDTNGVLKVSDFGLSTYAQQEDELLRTACGTPNYVAPEVLRDRGYVGSASDIWSCGVILFVLMAGYLPFDEPNHAALFRKISRADFSFPSWFAPESKKLLKRILNPDPLARIKIEELLEDEWFKKGYKPASFTEEEGVNVDDVAAAFNDSKENLVTERKEKPVSMNAFELISRSQGFNLDSLFEKQTGVVKRETHFTSQRPANEIMSKIEEAAKPLGFNVHKRDYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKNFSSGLQDIVWNAEEKK* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0619 435 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lan11g0619 435 CDD CIPK_C 311 424 - -
Lan11g0619 435 SMART serkin_6 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0619 435 Gene3D Transferase(Phosphotransferase) domain 1 95 295 - -
Lan11g0619 435 PANTHER - 9 432 - -
Lan11g0619 435 ProSiteProfiles Protein kinase domain profile. 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0619 435 Pfam NAF domain 307 367 IPR004041 GO:0007165
Lan11g0619 435 Pfam Protein kinase domain 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0619 435 Gene3D Phosphorylase Kinase; domain 1 5 94 - -
Lan11g0619 435 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Lan11g0619 435 SUPERFAMILY Protein kinase-like (PK-like) 11 291 IPR011009 -
Lan11g0619 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Lan11g0619 435 Gene3D Kinase associated domain 1, KA1 304 430 - -
Lan11g0619 435 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 9 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0619 Lan-Chr11 5001837 5006460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0619 5 435 CBL-interacting serine-threonine protein kinases AT1G01140 73.529 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan11g0619 Pkinase 5.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0619 - - lja:Lj3g3v2483040.1 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0619 11 5001837 5006460 Lan11g0619 11 5001837 5006460 ECH
Lan11g0619 11 5001837 5006460 Lan9g1005 9 16996379 17000941 LSH