Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0618 ATGGGGAAAAAGGGAAGTAGTTCTTGGTTAACTGCTGTTAAAAGAGCATTTAGATCTCCAACCAAAGACAGTGACAAAAGGAGTAGCAGAAGAAGAGAGGACTATGATCATGAAGAAGATGAAGAGAAGAAGAGAGAAAAAAGAAGATGGATTTTTAGAAAGAATCATGAAACAGCAAACATTCAACAAAGTCCAACAAAGTCTAAGCATGTTGTAGCTTCAACAACAAATGCAAGTGTAGCTTCAAGGATAGAACAAAATCAGAAGCATGCACTTGAAATGGCTATGGCAACTGCTGAGGCTGCTATGGCCACTGCTCAAGCTGCTGTGGAGGTTGCAAGGTTAACCAAGCCTAGTACAACTACTAATCATCACTCTAGGGACCATTTTGCTGCTATTGTGATTCAAACTGCTTTTAGAGGATATTTGGCTAGAAGAGCACTTTGTGCGCTTAAGGGGTTGGTGAAGTTGCAAGCTTTGGTAAGGGGTCACAATGTTAGGAAGCAGGCAAAGATGACCCTTAGATGCATGCAGGCTTTGGTTAGAGTACAAGCAAGGGTTCTTGATCAGCGCATAAGGTCTTCACTTGATGGTAGTCGAAAATCTACCTTCAGTGACACCGCCAGTGTTTCGGAATTGCGATATCTTCAGGAGATTTATGATAGGAAATCAGTATCAAGAGAAGGAAGCAGCATTGTAGATGATTGGGATGAAAGGCCACACACAGTTGAAGAAGTTAAGGCTATGTTGCAGCAGAGGAAGGAAGCAGCTATGAAGCGAGAAAAGTCCTTGTCTCAAGCCTTTTCGCAACAGATTTGGAGGAACGGTAGGAAATCGTCAATTGGAAATGAAGATGAGCTGGAAGAGAGGCCGAAATGGCTCGACCGGTGGATGGCTACGAAGCCATGGGAGGGCAGGGGAAGAGCTTCAACTGATCAGAGAGACCCCATTAAGACTGTCGAAATTGATACTGCTCAGCCTTACTCATATCTAGGAGGATCCAATTACAGAAGATCACATCCAAATTATCAATATAACCCACACCACCAACCACAAAGACATTCCATAGCTTCCCCTATCCACAGAACCCACCAAAATGGATCAATTCGCCAATCCCCTTCAACCCCGTCACCAGCTAAATCAAGACCAGTCCAAGTCCGGTCGGCAAGCCCTCGCTGTGTTAGAGAAGATAGAAACTTACACATCTCCCAAACACCAAGCCTTAGGTCTACTTACAGTTACACAGGGAACTTGTACCAAAATGGAAGGGCTGGAACAAGTAATAGCGGTGCTGCTGCATTGCCTAATTACATGGCTGCAACCGAGTCTGCAAAAGCTCGAATTCGATCGCAGAGCGCGCCGAGGCAGAGACCATCGACCCCAGAGAGGGAAAGAGGAGCTGGATCAGTTAAGAAAAGGCTTTCTTTCCCGGCTCCAGATCCTTATAATGTAGGAGCTGGTTATGGGAATTATGGGCAGAACTTAAGAAGTCCAAGCTTCAAGAGTGTATGTGCATCACATTTTGGTATGGAACAGCAATCCAACTACTCTTCTTGCTACACTGAGAGTATTGGTGGAGAAATTTCTCCTTCTTCAACTAGTGACCTTAGAAGGTGGCTTAGGTGA 1626 0.4471 MGKKGSSSWLTAVKRAFRSPTKDSDKRSSRRREDYDHEEDEEKKREKRRWIFRKNHETANIQQSPTKSKHVVASTTNASVASRIEQNQKHALEMAMATAEAAMATAQAAVEVARLTKPSTTTNHHSRDHFAAIVIQTAFRGYLARRALCALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSSLDGSRKSTFSDTASVSELRYLQEIYDRKSVSREGSSIVDDWDERPHTVEEVKAMLQQRKEAAMKREKSLSQAFSQQIWRNGRKSSIGNEDELEERPKWLDRWMATKPWEGRGRASTDQRDPIKTVEIDTAQPYSYLGGSNYRRSHPNYQYNPHHQPQRHSIASPIHRTHQNGSIRQSPSTPSPAKSRPVQVRSASPRCVREDRNLHISQTPSLRSTYSYTGNLYQNGRAGTSNSGAAALPNYMAATESAKARIRSQSAPRQRPSTPERERGAGSVKKRLSFPAPDPYNVGAGYGNYGQNLRSPSFKSVCASHFGMEQQSNYSSCYTESIGGEISPSSTSDLRRWLR* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0618 541 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 1 541 - -
Lan11g0618 541 MobiDBLite consensus disorder prediction 522 541 - -
Lan11g0618 541 MobiDBLite consensus disorder prediction 304 412 - -
Lan11g0618 541 MobiDBLite consensus disorder prediction 442 478 - -
Lan11g0618 541 MobiDBLite consensus disorder prediction 304 319 - -
Lan11g0618 541 PANTHER IQ-DOMAIN 5-RELATED 1 541 - -
Lan11g0618 541 MobiDBLite consensus disorder prediction 1 46 - -
Lan11g0618 541 Pfam Protein of unknown function (DUF4005) 390 495 IPR025064 -
Lan11g0618 541 MobiDBLite consensus disorder prediction 328 384 - -
Lan11g0618 541 ProSiteProfiles IQ motif profile. 128 156 IPR000048 GO:0005515
Lan11g0618 541 MobiDBLite consensus disorder prediction 18 46 - -
Lan11g0618 541 Pfam IQ calmodulin-binding motif 155 171 IPR000048 GO:0005515
Lan11g0618 541 Pfam IQ calmodulin-binding motif 131 148 IPR000048 GO:0005515
Lan11g0618 541 Gene3D - 126 180 - -
Lan11g0618 541 ProSiteProfiles IQ motif profile. 152 179 IPR000048 GO:0005515
Lan11g0618 541 SMART iq_5 150 171 IPR000048 GO:0005515
Lan11g0618 541 SMART iq_5 127 149 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0618 Lan-Chr11 4997315 5000228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0618 1 541 IQD Protein Family AT1G01110 56.771 2.65e-174 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0618 - - gmx:100799284 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0618 11 4997315 5000228 Lan11g0618 11 4997315 5000228 ECH
Lan11g0618 11 4997315 5000228 Lan9g1008 9 17020570 17023536 LSH