Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0617 ATGCCTGAAAACATGAGTATATCAGTGAATGGACAATCTCAAGTTCCTCCTGGCTTCAGGTTTCATCCAACTGAAGAAGAGCTTCTTCAGTACTACTTGAGGAAGAAGGTCTCTTATGAGAAGATTGACCTTGATGTGATTCGCGATGTTGATCTTAACAAGCTTGAGCCATGGGACATACAAGAGAAGTGCAAAATAGGAACCACCCCACAAAATGATTGGTACTTTTTCAGCCATAAAGACAAGAAGTATCCCACGGGAACTCGTACCAATCGCGCAACTGTTGCTGGATTCTGGAAGGCCACTGGTCGTGATAAGGTGATATATAGCAATGGGAAAAGGATTGGAATGAGAAAGACTCTAGTTTTCTACCAAGGTCGAGCACCTCACGGCCAAAAATCTGATTGGATCATGCATGAATATAGACTAGACGACAATAACACCAACAACACTATTGTGTCCAATGTGATGGGAGATGGAGGCCAAGAAGAAGGGTGGGTGGTGTGTAGAATATTCAAGAAGAAAAACCATCTCAAAACCCTAGACAGTCCCTTAGCCTCTTCTATCTCAAGGGAGGGAAGAAGAAGCTATTTGTTTGATTCTTGTGATAATGAGGGAGCTTTGGAGCATATTCTCCAACAAATGGGAAGGGGAATGTGCAAGGAAGAGAACTATGAAGCAAAGAATTACAACTACCATGACAACAGGTTCATGAAACTCCCTAGCCTAGAGACTCCAAAATCCACTAGCATGGAACCTGTAATACATATGGTAACAGAAAATGAAGGGTCATTCACAATCCAGCAGGACCCTAACATGTTTCATCATAATCCATTGGAGGTATCATCATCAATGATGGTAGGATCAAGTGGCCTTACAAATTGGGCAGCACTTGATACACTTGTTGCTTCTCAGCTGAATGGCCAAAATGATCAAGCTTCAAGGCAATTGGCCTGCTTCAATGACCCTACCTTGGGGTATAGCATTAGTGATCATGATCTTCAATTGCTTACCCTCCGATCATCATCAAACACAAGGAGTGCTATTTCTCCAGATGGTGGAGCTGCTTTCATTAGCCATACACAGGATTACACCAGTGAGATTGACCTGTGGAACTTTGCTCAATCCACATCATCCTCTGAAACAATATGCCACGTGTCGAACACGTTGGTGTAG 1176 0.4294 MPENMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKVIYSNGKRIGMRKTLVFYQGRAPHGQKSDWIMHEYRLDDNNTNNTIVSNVMGDGGQEEGWVVCRIFKKKNHLKTLDSPLASSISREGRRSYLFDSCDNEGALEHILQQMGRGMCKEENYEAKNYNYHDNRFMKLPSLETPKSTSMEPVIHMVTENEGSFTIQQDPNMFHHNPLEVSSSMMVGSSGLTNWAALDTLVASQLNGQNDQASRQLACFNDPTLGYSISDHDLQLLTLRSSSNTRSAISPDGGAAFISHTQDYTSEIDLWNFAQSTSSSETICHVSNTLV* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0617 391 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 8 344 - -
Lan11g0617 391 SUPERFAMILY NAC domain 9 174 IPR036093 GO:0003677|GO:0006355
Lan11g0617 391 ProSiteProfiles NAC domain profile. 15 174 IPR003441 GO:0003677|GO:0006355
Lan11g0617 391 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Lan11g0617 391 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 344 - -
Lan11g0617 391 Gene3D NAC domain 24 179 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0617 Lan-Chr11 4974087 4975909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0617 1 388 NAC Transcription Factor Family AT2G46770 57.500 1.35e-135 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan11g0617 NAM 5.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0617 - - ahf:112734309 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0617 11 4974087 4975909 Lan9g1011 9 17064835 17067011 LSH