Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0609 ATGGAAAAAGTAGAACAAACCAATGGTGCACTTGCACATATTGATCCTAAAGACAAACAACTTAACCATAAAAAAACTATAGTGGAAGAAGAAAAAAGCTTCACCTATGCTATGCAGCTAGTAAACTCTAGTGTTCTTTCAATGGCCTTGCAATCAACCATTGAGCTTGGTGTTTTTGACATCATAAACAAAGCAGGTGCAGGTGCCAAGCTCTCTGCTAAGGACATTGCTGAAGAGTTTTCATGCAAGAATCCTGATGCAGCAACAATGCTAGACCGTATTCTAAGGCTCCTTGCAAATCATTCCATTGTTGATTGTACTGTGATTGATGATGAAAATGGTCCTCCTCCACATTTGTTGAGGCTCTATTCCGTGGCCCCTGTGACCAAATACTTTGTTTCCAATGGTGGTGGTGGCTCATTGGGACCTTTGTTGTTGTTGACTCAGGACAAGGCCCTCCTTGAAAGTTGGTACCAACTAAAGGATGCAGTTTTGGAAGGAGGTATTCCATTCAACAGGGTCCATGGCAAACACGTCTTCCAGTATGCCAATTTGGACTCAAGCTTCAATCACCTTTTCAATATAGCAATGACCAATCGTGCCACTTTACTTATGAATAAGATTCTTGAATCTTACAATGGGTTTGAGCATTTCAATAAGCTGATTGACGTTGGTGGTAGTCTTGGTGTCACCCTTAACATAATCACTTCTAAATACCCTCACATTAAGGGTATCAATTTTGACTTACCTCAGGTCATAGAACGTGCCTTTCCCTACCCAGGTGTTGAACATGTGGGAGGAAATATGTTCGATAATGTACCACAAGGAGATGCCATTTTGATGAAGTGTGTACTCCATGATTGGAGTGATGAAGACTGCTTGAAAGTGTTGAAGAACTGCTATGCAGCTATTCCTGATAATGGTATACTGATTGTTGTGGAGGGAGTTCTTCCATTTGAACCTGAGACAACTGATGCAGTGAGGAGCATTTCTCAATTTGATGTTCTCATGATGACAACAAACCCAGGAGGGAAAGAGAGAAGTGAATATGAGTTCATGACACTAGCAAAAGGTGCTGGATTCAGTGGCATTAAATATAAATGCTTTGTCTATGATGTCTGGGTTATGGAATTCTTCAAGTAG 1143 0.4086 MEKVEQTNGALAHIDPKDKQLNHKKTIVEEEKSFTYAMQLVNSSVLSMALQSTIELGVFDIINKAGAGAKLSAKDIAEEFSCKNPDAATMLDRILRLLANHSIVDCTVIDDENGPPPHLLRLYSVAPVTKYFVSNGGGGSLGPLLLLTQDKALLESWYQLKDAVLEGGIPFNRVHGKHVFQYANLDSSFNHLFNIAMTNRATLLMNKILESYNGFEHFNKLIDVGGSLGVTLNIITSKYPHIKGINFDLPQVIERAFPYPGVEHVGGNMFDNVPQGDAILMKCVLHDWSDEDCLKVLKNCYAAIPDNGILIVVEGVLPFEPETTDAVRSISQFDVLMMTTNPGGKERSEYEFMTLAKGAGFSGIKYKCFVYDVWVMEFFK* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0609 380 Gene3D Vaccinia Virus protein VP39 134 380 IPR029063 -
Lan11g0609 380 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 138 378 IPR029063 -
Lan11g0609 380 Gene3D - 16 132 IPR036388 -
Lan11g0609 380 Pfam O-methyltransferase domain 157 362 IPR001077 GO:0008171
Lan11g0609 380 SUPERFAMILY "Winged helix" DNA-binding domain 29 135 IPR036390 -
Lan11g0609 380 PANTHER O-METHYLTRANSFERASE 21 380 IPR016461 GO:0008168
Lan11g0609 380 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 38 380 IPR016461 GO:0008168
Lan11g0609 380 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 21 380 - -
Lan11g0609 380 PIRSF O-mtase 15 380 IPR016461 GO:0008168
Lan11g0609 380 Pfam Dimerisation domain 48 99 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0609 Lan-Chr11 4890223 4892492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0609 28 380 Monolignol Biosynthesis Gene Families AT5G54160 48.442 1.76e-124 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0609 K13066 - gmx:100788873 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0609 11 4890223 4892492 Lan11g0609 11 4890223 4892492 ECH