Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0607 ATGGACGCATACTCTTCTGGTGAAGAAGTGGTTGTTAAGGCGCGAAAACCATATACAATCACAAAGCAAAGAGAAAGATGGACGGAGGAGGAACACAATAGGTTTCTACAAGCTTTAAAGCTTTATGGACGAGCATGGCAGCGCATAGAAGAACATATCGGAACAAAGACTGCCGTGCAAATCAGGAGCCATGCACAAAAGTTCTTTACAAAGTTGGAGAAAGAGGCCCTTGTTAAGGGTTCACCAATTGGACAAGCTCTTGACATAGACATCCCCCCTCCAAGGCCCAAAAGAAAACCAAGCAATCCTTATCCTCGGAAGACCAATGTAGGTGCCCCAACATATCAGGGTGGAGCAAAGGATAGAAAACTCATTTCAGTTGAATCTTCCCATGTTAAACAAACATTGGACTTTGAAAAAGTTCCACTTCCAGAGAAATATAATGACGGCGAAAGGCAAACACATGTAAAGGATAATAAGGATGAGAACTGCTCAAAAGTATTTCCTGTTCTCCAAGAGGCACCCTGTTCATCTGTATCTTCAGGAAACAAGAGCTCAATATCAATGTCAGCACCACTGAGAAATTCATGCACATTAAGGGAGATTATATCTTCAATGAAAGAGGCAATATCGCAAGATGAAATAAATGAATCTCTTGTCACTATTGAACCTGAAAATCGGAAGCTGGAGGTAGATGATGGGAAACAGATTAATGGTACCAGAACAGAGTCCCAGTTGGAGAATTGTGATGCTTCACAAGTGAAATTGGTTCAAAGTGAGAAAACAGATGGTCTTAATTGCACGTTAACAATAGATGGAATGCAAGGAAATCAGAGTTATCCTAAACATGTTACTGTTCACGTTGTTAATGGGAACCTTGGAACAAGTACTCAAAACCCATCCCTAGATATGCTGTTTCGGGATTCCATGTTTCAACCAATTGGAAAGGTTAACGGGCAGCCTAATCTTTTCACAAATTCAGCTGCATCAAACATAAGCGAAAATCAAAATAACACAGCACCATCTTCTATTCATCAACCAGATATTCCTTATCCTCCCTTTGCACAACATAATCGACATGATTGCCAACCATTTCTTCATCTGTCTACCACATTTTCAAATCTAACTGTTTCTACCTTGCTGCAAAACCCAGCAGCCCATGCTGCAACAAGTTTTGCTGCTGCATTTCTGCCCTATGAAAATGCAGAAACTTCAGCAAATTCTCCTGCATGCTTTCAAGGAAGTTTTCCATCCAGACAAATTGGCTCCTCTCCCAATGTGGAGGCTATTGCAGCTGCTACTGTAGCTGCAGCAACTGCATGGTGGGCTGCCCATGGATTGCTTCCAGTATGTGCTCCTCTCTATACTGCTTTTGTCTGTCCTACAGCATCAATGACTGCAGTTCCATTAATGAATATTGATGAAGCACCCGCGCCAAACACAGAGCTAGAAGAGAGTACTCTCCAAAATCCTCCTTCGCAAGATCAGATGCTGGATCCAGAACACCCAGAAGCTCAACATTCAGCTTCTAAGCCATCGACTGTTATTTCATCAGATTCTAAAGAGAATGGAGATGGCAGTTTAAATACTTCATTAAAGGCTACTACTGATCATGAAATGAACACAACAATTTCTGAGAACTTCGATTCTGACAAAACAAAGAGCAGAAAACAGGTTGATCGTTCCTCATGTGGTTCCAATACAACCTCTAGCAGCGATGTCGAGACTGATGCATTAGAGAAGAATGGGAAAGGGAATGAACAGCCTGTAGCACCTGAACCTGATGCTAACCATTTAATCACAGAGTCTAGTAATCGTCGTAGTAGAAGCATTGTCAACCTTATTGATCCTTGGAAGGAGGTGTCTGAAGAGGGGCGATTGGCCTTTCGGGCTCTTTTCTCCAGAGAGGTGTTGCCGCAGAGCTTCTCACTGCATGATTTAAAAAATAAGGATCACCAAATGGACAACATTAAGGATAACAATCAAAACGTAGATGACAAATATGAAGACCTTAACAGCAAGAAATGCTGTTCTGATTGTGAAGGAATGCAGAAAAATCTGCCATTTCTAGAAAATGAGGAGAGGCTGCTAACCATGGGGCTTGGACAAGGAAATCTCAAGACTCGCCCAACAGGCTTTATACCATACAAAAGATGTTCAGTGGAGGCCAAGGAAAACAACGTTGGAACAAGCAACAACCAAGCTGAAGAGAAGGGTTCTAAGAGAATACGCTTGGAAGGGGAAGCTTCAATTTGA 2256 0.4202 MDAYSSGEEVVVKARKPYTITKQRERWTEEEHNRFLQALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEALVKGSPIGQALDIDIPPPRPKRKPSNPYPRKTNVGAPTYQGGAKDRKLISVESSHVKQTLDFEKVPLPEKYNDGERQTHVKDNKDENCSKVFPVLQEAPCSSVSSGNKSSISMSAPLRNSCTLREIISSMKEAISQDEINESLVTIEPENRKLEVDDGKQINGTRTESQLENCDASQVKLVQSEKTDGLNCTLTIDGMQGNQSYPKHVTVHVVNGNLGTSTQNPSLDMLFRDSMFQPIGKVNGQPNLFTNSAASNISENQNNTAPSSIHQPDIPYPPFAQHNRHDCQPFLHLSTTFSNLTVSTLLQNPAAHAATSFAAAFLPYENAETSANSPACFQGSFPSRQIGSSPNVEAIAAATVAAATAWWAAHGLLPVCAPLYTAFVCPTASMTAVPLMNIDEAPAPNTELEESTLQNPPSQDQMLDPEHPEAQHSASKPSTVISSDSKENGDGSLNTSLKATTDHEMNTTISENFDSDKTKSRKQVDRSSCGSNTTSSSDVETDALEKNGKGNEQPVAPEPDANHLITESSNRRSRSIVNLIDPWKEVSEEGRLAFRALFSREVLPQSFSLHDLKNKDHQMDNIKDNNQNVDDKYEDLNSKKCCSDCEGMQKNLPFLENEERLLTMGLGQGNLKTRPTGFIPYKRCSVEAKENNVGTSNNQAEEKGSKRIRLEGEASI* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0607 751 MobiDBLite consensus disorder prediction 507 548 - -
Lan11g0607 751 Gene3D - 26 73 - -
Lan11g0607 751 Coils Coil 647 674 - -
Lan11g0607 751 MobiDBLite consensus disorder prediction 737 751 - -
Lan11g0607 751 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Lan11g0607 751 MobiDBLite consensus disorder prediction 482 496 - -
Lan11g0607 751 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Lan11g0607 751 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Lan11g0607 751 MobiDBLite consensus disorder prediction 560 576 - -
Lan11g0607 751 PANTHER PROTEIN LHY 2 733 - -
Lan11g0607 751 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Lan11g0607 751 SMART sant 23 71 IPR001005 -
Lan11g0607 751 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Lan11g0607 751 MobiDBLite consensus disorder prediction 725 751 - -
Lan11g0607 751 MobiDBLite consensus disorder prediction 85 120 - -
Lan11g0607 751 MobiDBLite consensus disorder prediction 332 353 - -
Lan11g0607 751 CDD SANT 26 69 IPR001005 -
Lan11g0607 751 PANTHER SWI/SNF COMPLEX-RELATED 2 733 - -
Lan11g0607 751 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Lan11g0607 751 MobiDBLite consensus disorder prediction 480 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0607 Lan-Chr11 4858581 4866572 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan11g0607 Myb_DNA-binding 3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0607 K12133 - gmx:100271888 1011.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0607 11 4858581 4866572 Lan11g0607 11 4858581 4866572 ECH
Lan4g0816 4 10166265 10173128 Lan11g0607 11 4858581 4866572 PCT
Lan11g0607 11 4858581 4866572 Lan4g0816 4 10166265 10173128 PCT