Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0606 ATGTTAACCGTTGTTGTCTTAACTTTTGTTGTTGTTAGTTTTGGAGTACTTGTGTTTTTGCCTTTTTCTTATTCCCTTCAAGTGCAAGGAAAACTACTACAACCCTCTTTGATTCCAAATTCTTGCAATGAAATATGTGGGAAACTTCATGTTCCTTTTCCATTCTATGTGAACACTACTTGTGTTTCAATCTCTAGTGCTTTTCACCTCACTTGCTCAAATTCCTCTACCCTTTTAATCAAATTTGGTTCAGAAAGCTATCAAGTGTTGGAATTCTTCCAAGATGGTTTGTTAGTGGACTTTCCAGGCACATCATTGTGTCGCCAGTACAATGACTTGAACTCATTTGGTAACAATTTTTCAGGAAAATACCACTTTGGAGTCTCAGTTGACAATGTTATTGGCCTCTATGACTGTGAGGATTCTTCTCTTTGCAAAGCGGATTGCGAAACGGTTGATCTACCCGGCTGTGATGGAAGCAGCGGTGGCTCCCTTGGTTGCTGTTATCCACTCTCTGACCATAGCATATGGCATGTTGGACAAGGCTTCTCAGTGTTTTCTCAGTTTGGATGCAGGGGATTTTCTAGTTGGGCTGTTTTGAGAGGCTCGAATTCCGGAAAACGCGGTGTCAAGTTGGAATGGGCTATTCCAAGAAACTCCTCAAAGAAAGTTTGTGCAAGGAATGCAGATATGATAAATGCTACATCAATTGAAGATGGTGTAAGGTGTGTTTGTCAAGATGGATATGATGGTGATGGGTTTACTAATGGATCAGGATGCTTGCAGTCCTGCATAAAAAATGGACAGGAAGCATATGGAAATGATTGCTACATCAAAGGACATGATCAAAGGAAAATTGTTATCATTGCTGGAATCCTTGGTCCAGTTCTTATTGTTGCCTCCTTGGTTGCACTACTTTATCTTCTTAAAAGACCAATAAAACCAGAGATGCCAGACACCGAGCAGGCTTATTATCACAACGTTTCAATCCGTAAAGCTTGTAGGCCTCGACTATTCAGCCACCATGAGCTAGAGGAAGCCACCAGCGGCTTCGAAGAGAGCCGGAAACTCATGCAAGGTACTAATGGAACAATGTTTGCTGGAGTTCTTGGAGATGGATCACATGTAGCTATACACAAGTTAAAATGTGAGAATGAGAGAGACATAATTCAAGTCCTGGCACAAATTGAGGTTCTATCTGCTGTTGTACATAGAAACATGGCATGTCTTATTGGATGCTGTATTGACTCTGCATACACTCCTCTAGTGGTGTATGATTATCCTGCAAATGGTACCTTGGAGGAACATTTACACCAAAGTAAAGGACAAAGATATGGTTTAGATTGGTATACGAGATTGTCTATTGCTACGGAAACTGCTTGTGTTGTTGCGTTCTTACATTATGAGAACTCTCCTCCTATATTCCATCATAACCTTAAATCTAACTGCATCTTCCTAGATGATGATTTTTCTGTCAAGATTGCAGGATTTTGCCTAGTTAATTCCAATTTCAATCACGATTCTCAGTTGCACAAGAATCGCGAATGCTTTCGCTTATGCAAAAACGATGTCTATGACATGGGAGTGGTACTTCTCGAGATTATCTCGGGTTCAAATCGATTGGACTCGCCGACTTTAGCCTTGCAGAAAATAAAAGACGGAAAGATAGAAGAAATCGTTGATCCACTTCTTTGCTATCACGAACAACCTTATCATTGCCAAGAGCAAATACTAACAATTGCAGACCTTTCAACAAGATGCATGCTATTTGGAGCAGATGGAAAGCTTGGAATGATTGATGTTGCAAGAGAGTTAGTACACATAACTAAAGAGAATCTTGATGGAGGAGTTATGAGAGGGCCTGCATTGGAAGAAACATTCTCAAATTCAAGCCTTCTTCAAATGATATCAATGTCTCCTGATTCTATGAATGTTTCTTGA 1941 0.4019 MLTVVVLTFVVVSFGVLVFLPFSYSLQVQGKLLQPSLIPNSCNEICGKLHVPFPFYVNTTCVSISSAFHLTCSNSSTLLIKFGSESYQVLEFFQDGLLVDFPGTSLCRQYNDLNSFGNNFSGKYHFGVSVDNVIGLYDCEDSSLCKADCETVDLPGCDGSSGGSLGCCYPLSDHSIWHVGQGFSVFSQFGCRGFSSWAVLRGSNSGKRGVKLEWAIPRNSSKKVCARNADMINATSIEDGVRCVCQDGYDGDGFTNGSGCLQSCIKNGQEAYGNDCYIKGHDQRKIVIIAGILGPVLIVASLVALLYLLKRPIKPEMPDTEQAYYHNVSIRKACRPRLFSHHELEEATSGFEESRKLMQGTNGTMFAGVLGDGSHVAIHKLKCENERDIIQVLAQIEVLSAVVHRNMACLIGCCIDSAYTPLVVYDYPANGTLEEHLHQSKGQRYGLDWYTRLSIATETACVVAFLHYENSPPIFHHNLKSNCIFLDDDFSVKIAGFCLVNSNFNHDSQLHKNRECFRLCKNDVYDMGVVLLEIISGSNRLDSPTLALQKIKDGKIEEIVDPLLCYHEQPYHCQEQILTIADLSTRCMLFGADGKLGMIDVARELVHITKENLDGGVMRGPALEETFSNSSLLQMISMSPDSMNVS* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0606 646 Pfam Protein tyrosine and serine/threonine kinase 354 536 IPR001245 GO:0004672|GO:0006468
Lan11g0606 646 ProSiteProfiles Protein kinase domain profile. 351 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0606 646 SUPERFAMILY Protein kinase-like (PK-like) 333 605 IPR011009 -
Lan11g0606 646 Gene3D Phosphorylase Kinase; domain 1 322 427 - -
Lan11g0606 646 PANTHER OS10G0351500 PROTEIN 51 641 - -
Lan11g0606 646 Gene3D Transferase(Phosphotransferase) domain 1 429 616 - -
Lan11g0606 646 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 51 641 IPR045274 GO:0007166
Lan11g0606 646 Pfam Wall-associated receptor kinase galacturonan-binding 42 94 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0606 Lan-Chr11 4852264 4855070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0606 5 608 Receptor kinase-like Gene Family AT2G23450 29.612 3.71e-63 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lan11g0606 PK_Tyr_Ser-Thr 2.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0606 - - gmx:100810557 974.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0606 11 4852264 4855070 Lan11g0606 11 4852264 4855070 ECH