Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0594 ATGGTGGAGAATCGAAGGCTAGTGCTGGTTTTGATCAGCACCTGCATTCTTGGTTTAATCCCTATTCCCACCAATGGTGACACAGATCCAAATGATGTTGCTTCTCTAAAGGTTATGTTTCAAAGTATGAACTCACCGTCCCAGCTAAATTGGCCTCAAAATGGTAATGATCCTTGTGGACAGTCTTGGAAAGGCATTACTTGCTCAGGCAACCGAGTCACGGAGATTAAGTTACCTGGTCTTCAACTGAGTGGAAATTTGGGTTACCAATTACAATCCTTGACATCTGTGACTACCCTAGACTTGAGTGATAACAATCTTGGTGGAACCATACCATACCAACTTCCTCCAAATGTGAAGCACTTAAATCTTGCTAATAATAATTTCAATGGGGCGGTCCCGTATTCTCTTTCTGATATGGCTTCTCTTGTGGACCTGAATCTTGGTCATAATCAGCTCCAGCAAGCGTTGAGTGTCAACTTTCAAAAGCTTACTTCCCTCACTACATTGGATCTCTCTTTCAATTCTTTGACAGGAGACCTCCCTCAGACTTTGAGCTCACTTTCAAGCATATCCACCATGAATCTACAAAACAACCAGTTTACAGGCACCATTGGTGTCCTTGCGAATCTGCCTCTCGAGAATCTGAATGTAGAAAACAATAAGTTTTCAGGCTGGGTACCAGAACGGCTGAAAAGCATAAACCTAAAGACGGACGGTAATACTTGGGTCTCAGGACCTGCACCCCCACCTCCTCCGGGCACACCTCCTCCGGGCACACCTCCAGTAACAAAAAAGCAAAATCAGAAATCTGGTGGACAAAGCACGCCTTCAGATTCTGGCACAAGTGATGGAGGCAAAAAATCTGGTATAGGAGGTGGTGCCATTGCCGGAATTGTGATATCCATCTTGGTCGTTGGGGCAATAGTGGCATTCTTTCTGGTGAAGAGAAAATCCAAGAAGTCGTCTTTTGACATGGAGAAGCTTGACAGTCAGCCCTTAGCTCCTCTTACCTCAAATGAAGTGCATGAAATGAATTCTATGCAATCGTCATTTGTAAATGATTTGAAGACATTTGATCCTCCTCCTGCGCCCCCAATAAATCTTAAGCCTCCACCTGTGGATCGTCATAAATCAGCTGATGAGAATGAATTCTCAAGTAAGCCCGTTATTGCCAAGAAGACCGTACCAGCTCGTGCAAATGTGAAATCATATTCAATAGCTGACCTGCAGATTGCTACTGGAAGCTTCAGTGCAGATCAACTTGTTGGTGAGGGTTCTTTTGGACGTGTATACCGTGCTCATTTTGATGATGGAAAGGTTCTTGCAGTGAAGAAGATAGATTCATCTGTCCTTTCCAATGATCGGTCTGAAGGTTTTACAGAAATAGTTTCAAGTATCTCTCATTTGCATCATCCAAATGTGACAGAGCTTGTAGGTTATTGTTCAGAGCATGGACAACACCTCCTAGTCTATGAGTTTCACAAAAATGGATCACTGCATGACTTCCTTCATCTACCCGATGAGTATAGTAACCCGTTGATATGGACTACGCGTGTCAAGATTGCTTTGGGGACTGCACGTGCCTTAGAGTACCTACACGAAGCTTGTTCACCATCAGTTGTTCACCGGAATATTAAGTCGGCCAATATATTGCTTGATTCAGATCTTAATCCTCATCTTTCAGACAGTGGATTGGCAAGCTATATTCCAAATGCCAACCAGGTATTGAACAATAATGCTGGATCTGGGTATGATGCCCCTGAAGTTGACTTATCTGGTCATTGTAGTCTGAAAAGTGATGTATATAGCTTTGGAGTTGTCATGTTGGAACTTCTCAGTGGTCGGAAACCATTTGATAGCTCAAGGCCAAGATTTGAGCAGTCTGTAGTTCGATGGGCAACACCTCAACTTCATGATATTGATGCATTGGCCAAAATGGTCGATCCTGCATTGGAAGGGCTATACCCTATTAAGTCTCTTTCTCGATTTGCTGATGTTATTGCTCTTTGTGTTCAGCCGGAGCCAGAGTTCCGACCACCAATGTCAGAAGTGGTTCAAGCACTGGTTCGATTAGTGCAACGAGCTAACACAAGCAAGCGGACATATGGAGCTGATCAAGCAGGATCCAGCCGATGGGGTGATGATCAAGAGGACATGTAA 2163 0.4387 MVENRRLVLVLISTCILGLIPIPTNGDTDPNDVASLKVMFQSMNSPSQLNWPQNGNDPCGQSWKGITCSGNRVTEIKLPGLQLSGNLGYQLQSLTSVTTLDLSDNNLGGTIPYQLPPNVKHLNLANNNFNGAVPYSLSDMASLVDLNLGHNQLQQALSVNFQKLTSLTTLDLSFNSLTGDLPQTLSSLSSISTMNLQNNQFTGTIGVLANLPLENLNVENNKFSGWVPERLKSINLKTDGNTWVSGPAPPPPPGTPPPGTPPVTKKQNQKSGGQSTPSDSGTSDGGKKSGIGGGAIAGIVISILVVGAIVAFFLVKRKSKKSSFDMEKLDSQPLAPLTSNEVHEMNSMQSSFVNDLKTFDPPPAPPINLKPPPVDRHKSADENEFSSKPVIAKKTVPARANVKSYSIADLQIATGSFSADQLVGEGSFGRVYRAHFDDGKVLAVKKIDSSVLSNDRSEGFTEIVSSISHLHHPNVTELVGYCSEHGQHLLVYEFHKNGSLHDFLHLPDEYSNPLIWTTRVKIALGTARALEYLHEACSPSVVHRNIKSANILLDSDLNPHLSDSGLASYIPNANQVLNNNAGSGYDAPEVDLSGHCSLKSDVYSFGVVMLELLSGRKPFDSSRPRFEQSVVRWATPQLHDIDALAKMVDPALEGLYPIKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANTSKRTYGADQAGSSRWGDDQEDM* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0594 720 Gene3D Ribonuclease Inhibitor 29 247 IPR032675 -
Lan11g0594 720 MobiDBLite consensus disorder prediction 245 263 - -
Lan11g0594 720 PANTHER OS01G0253100 PROTEIN 18 718 IPR045271 GO:0004714|GO:0006468
Lan11g0594 720 ProSiteProfiles Protein kinase domain profile. 417 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0594 720 PRINTS Leucine-rich repeat signature 97 110 - -
Lan11g0594 720 PRINTS Leucine-rich repeat signature 164 177 - -
Lan11g0594 720 Pfam Leucine Rich Repeat 166 188 IPR001611 GO:0005515
Lan11g0594 720 Gene3D Transferase(Phosphotransferase) domain 1 496 711 - -
Lan11g0594 720 MobiDBLite consensus disorder prediction 701 720 - -
Lan11g0594 720 Pfam Protein tyrosine and serine/threonine kinase 420 689 IPR001245 GO:0004672|GO:0006468
Lan11g0594 720 Gene3D Phosphorylase Kinase; domain 1 378 494 - -
Lan11g0594 720 SUPERFAMILY Protein kinase-like (PK-like) 401 689 IPR011009 -
Lan11g0594 720 MobiDBLite consensus disorder prediction 264 285 - -
Lan11g0594 720 SMART LRR_typ_2 164 188 IPR003591 -
Lan11g0594 720 SMART LRR_typ_2 140 163 IPR003591 -
Lan11g0594 720 SMART LRR_typ_2 94 121 IPR003591 -
Lan11g0594 720 SUPERFAMILY L domain-like 29 231 - -
Lan11g0594 720 ProSitePatterns Protein kinases ATP-binding region signature. 423 446 IPR017441 GO:0005524
Lan11g0594 720 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Lan11g0594 720 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 18 718 - -
Lan11g0594 720 MobiDBLite consensus disorder prediction 238 288 - -
Lan11g0594 720 Pfam Leucine rich repeat 96 153 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0594 Lan-Chr11 4710526 4717917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0594 8 711 Strubbelig Receptor Gene Family AT1G53730 64.017 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lan11g0594 PK_Tyr_Ser-Thr 3.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0594 - - gmx:100780323 1054.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0594 11 4710526 4717917 Lan9g1024 9 17481203 17488710 LSH
Lan11g0594 11 4710526 4717917 Lan2g0873 2 19118762 19126700 LSH
Lan16g1129 16 18361185 18369032 Lan11g0594 11 4710526 4717917 PCT
Lan11g0594 11 4710526 4717917 Lan16g1129 16 18361185 18369032 PCT