Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0556 ATGGCCATAGCTGGGGTAATAATCCTCCAGCTAAATCTCTTTTTCATATTCATTAACATTTTTCCAATGGCATATTCTATATCAGAAGCTGAAGCTTTGTTGAGTCTGAAAAAATCATTTTCCAATGCTGAAGCTCTTGATACTTGGGTGGCTAGCACCTCACCTTGCAGTGAAGATGATCAATGGGAAGGTCTTGTATGCAACAATGGCCAAGTCACCGGGATTCGCCTCGGAGATATGGGTTTACAAGGGGAAATTGATGTTGATGCATTGCTTGAACTTAAGGCTCTTAGAACTATAAGCCTTGTGAAAAATTCTTTCAATGGTTCTATACCAAAACTTAGTAAAATTGGTTTCTTGAAAGCAATTTATTTGTCAGGGAATAAGATCTCAGGAGAAATTCCTGAAGATTACTTTCAAGAAATGAGGTCTTTGAAGAAATTGTGGCTAGATGGTAATGAATTCACAGGCCAAATTCCTTCATCATTGTCTAAAATGCCTCATCTTATGGAGTTACATTTGGAGAATAATCAGTTTAATGGAACTATTCCAGATCTTGATAACCCTGCATTGGTGGATTTCAATGTGTCAAACAACAAATTGGAAGGTGGAATTCCGGCTAGTTTATTAAAATTCAATGAGAGTTCCTTTGGTGGGAATTCTGGTGTTTGTGGTGAGAAATTTGAGACAAAATGTGATGAAAAGGGAAAAAAGGAGGCACCAAGCCCCGTTCCGGCCGAAAAGAATGAAAACACAATCATCACTGATAATGGTAATGCATCTCAGACAGATAAGGGTAAGATTAGCACAGCTGCAATTGCTGGCATTGTAGCAGCATGCATAGTGGTTATTTTGCTTGTTGCTTATTTGTTTGTGAGATCAAGGAAAAAGAAGGGTGATGAGGATTTTGATGGTATAATTGGAAAAGAGACTAATGAAGATGCAGTAGAAGTTCAAGTAACTGCACCAGTGAAAAGAGAAGCGCCTGCTGAATCAATGAGAAAATCAACATCTAGCCGAAAAAGTGGATCCGGACATCATCATGTTAAGGGGGTTGGAGAACTTGTAATGATAAATGAGGAGAAGGGTATTTTTGGCTTACCAGATTTGATGAAAGCAGCTGCAGAAGTTCTAGGAAATGGAGCATTTGGATCTTCTTACAAAGCTGTGATGGCTAATGGAGTTGCAGTGGTGGTGAAAAGGACTAGAGAAATGAATGCATTGGAAAAAGATAGCTTTGATGCTGAGATGAAGAAGTTTGCAAGCCTTAAACACTGGAATATCTTGACACCTTTAGCTTATCATTACAGAAAGGATGAGAAACTAGTGATCTCTGAATATGTTCCCAGAGGAAGTTTACTCTTTTTGCTGCATGGTGATAGGGGACCATCACATGCTGAACTGGGTTGGCCTGCACGTTTAAAGATTGTAAAAGGAATAGCTGAAGGGATGCATTATCTTCACATGGAGCTCGCTTCTTTTGATCTACCACATGGAAATCTCAAGTCCAGTAATATTCTCCTAGGACCAGATTATGAACCACTTATAGTAGATTATGGTTTTAGCCATTTGATAAACCCTGCAAATGCAACACAAACACTATTTGCTTATAAGGCTCCTGAAGCAGCACAAGGCCAAATCTCACATAAATGTGATGTTTATTGCCTTGGTGTTGTTATACTTGAAATACTCACTGGCAAATTCCCTTCTCAATATCTCAGCAATGGAAAGGGTGGAACTGATGTAGTGCAATGGGTTGCATCAGCAATATCTGAGGGAAGGGAATTGGAACTTCTTGATCCTCAGATTGCAACCTCAAGGAATAACTCACAAGGTGAAATTGAACAACTAATCCATATTGGTGTTGCTTGCACTGAAAGTAACCCTCGCCAACGTTTAGATATGGCAGAAGCTAATAGAAGAATAGAGGAAATAAGGAATGAGGGAGGGAAAGGATCAAGAACAATAGAGGTGATACCATCTCTAAGAGATGGCTATGCAGATTCTCATAATGTATTAGGAGCACAAGAACACCATAGTGGTCAATCTAGGAGGAGTAATGGATCTAATAGCTCTGGAAGGAAAGATAACTTTGAATTTGGCATCTCCTAG 2112 0.3925 MAIAGVIILQLNLFFIFINIFPMAYSISEAEALLSLKKSFSNAEALDTWVASTSPCSEDDQWEGLVCNNGQVTGIRLGDMGLQGEIDVDALLELKALRTISLVKNSFNGSIPKLSKIGFLKAIYLSGNKISGEIPEDYFQEMRSLKKLWLDGNEFTGQIPSSLSKMPHLMELHLENNQFNGTIPDLDNPALVDFNVSNNKLEGGIPASLLKFNESSFGGNSGVCGEKFETKCDEKGKKEAPSPVPAEKNENTIITDNGNASQTDKGKISTAAIAGIVAACIVVILLVAYLFVRSRKKKGDEDFDGIIGKETNEDAVEVQVTAPVKREAPAESMRKSTSSRKSGSGHHHVKGVGELVMINEEKGIFGLPDLMKAAAEVLGNGAFGSSYKAVMANGVAVVVKRTREMNALEKDSFDAEMKKFASLKHWNILTPLAYHYRKDEKLVISEYVPRGSLLFLLHGDRGPSHAELGWPARLKIVKGIAEGMHYLHMELASFDLPHGNLKSSNILLGPDYEPLIVDYGFSHLINPANATQTLFAYKAPEAAQGQISHKCDVYCLGVVILEILTGKFPSQYLSNGKGGTDVVQWVASAISEGRELELLDPQIATSRNNSQGEIEQLIHIGVACTESNPRQRLDMAEANRRIEEIRNEGGKGSRTIEVIPSLRDGYADSHNVLGAQEHHSGQSRRSNGSNSSGRKDNFEFGIS* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0556 703 Coils Coil 628 648 - -
Lan11g0556 703 MobiDBLite consensus disorder prediction 234 258 - -
Lan11g0556 703 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 650 - -
Lan11g0556 703 Pfam Protein kinase domain 376 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0556 703 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 11 650 - -
Lan11g0556 703 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
Lan11g0556 703 Gene3D Transferase(Phosphotransferase) domain 1 448 657 - -
Lan11g0556 703 Gene3D Ribonuclease Inhibitor 23 114 IPR032675 -
Lan11g0556 703 SUPERFAMILY L domain-like 27 212 - -
Lan11g0556 703 Gene3D Ribonuclease Inhibitor 115 233 IPR032675 -
Lan11g0556 703 MobiDBLite consensus disorder prediction 675 697 - -
Lan11g0556 703 SUPERFAMILY Protein kinase-like (PK-like) 376 641 IPR011009 -
Lan11g0556 703 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Lan11g0556 703 MobiDBLite consensus disorder prediction 324 348 - -
Lan11g0556 703 MobiDBLite consensus disorder prediction 674 703 - -
Lan11g0556 703 ProSiteProfiles Protein kinase domain profile. 372 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0556 703 Gene3D Phosphorylase Kinase; domain 1 350 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0556 Lan-Chr11 4331072 4334396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0556 8 645 Receptor kinase-like Gene Family AT3G42880 46.107 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan11g0556 Pkinase 2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0556 - - lang:109337801 1113.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0556 11 4331072 4334396 Lan9g1055 9 17745267 17748420 LSH