Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0555 ATGGATTCGTCGCCGCCGCCGATGACGCCGGAGAAGTTACCGTTCTCTGAAGCAGAGAAGATAATACTCCGATGGGACTCCACCGCGTCGGAGGAAGCGCGTGAGAAGATGATCTTCGACGGCGACCGCCACGAAGTCGATCGCTACCTCCAAGCCGTGGATGAAATCCAACGCTCAATCTCCTCCACCTCACTCTCCGATGACCAGAACAAAGTCAACTCCGCCGTTCAGATCGCCATGGCTCGCCTCGAAGACGAGTTTCGCAACATCCTCATCTCCAACACAATCCCCATCGAAGCTGATTCCATCACCGAACAAGAACAAGAACAACAACCTCCATCTTCATCTTCATCTTCTTCTTCTCCGGTTCATCATGAAGCTGCTAATGATAGTAACCATTGTAACGATGAAGCTAACAAGCTCTTTCGTTTTAACAGTGAAGGAACTGGTTCTAGCGTAAGTGTTAATAGTAGCTACCGTTCAACTAGTAGTATTCGCGAGATCGATCTGATTCCTTCTGAAGTTGTCTATGATCTTCGCTGCATCGCAGAACGAATGATCTCTTCAGGTTACTTACGTGAATGCATTCAGGTATATGGAAGTGTGAGAAAATCAGCAGTTGATGCGAGTTTTCGAAAACTAGGGATCGAAAAATTGAGCATTGGTGATGTTCAGAGATTGGAATGGGAGCAGCTTGAAACCAAGATCAGGCGTTGGATTAGAGCTGCTAAGGTTTGTGTTAGAACACTTTTCGCGAGTGAGAAGAAGTTATGTGAACAAATCTTTGATGGGGTTGGAACTTGTATTGATGATGCTTGTTTTATGGAAACTGTGAAAGGTCCTGCTATTCAGCTTTTTAATTTTGCTGAGGCTATTAGTATTAGTAGGAGGTCACCTGAGAAGTTGTTTAAGATTCTTGACCTTCATGATGCTTTGATGGATTTGATACCTGATATTGATCTTGTGTTTGATTCTAAGTCATCCGATTCGATTCGGGTTCAGGCAGCCGAGATTCTTTCTAGGTTGGCTGAGGCTGCTAGAGGGATTTTGTCTGAGTTTGAGAATGCTGTGTTGAGGGAACCTTCTAAGGTTCCTGTCCCTGGTGGTACAATTCATCCTTTGACTAGGTATGTCATGAATTATATCAGTTTGATCTCTGATTATAAGATGACTTTGAATGAGCTCATTGTGTCGAAGCCTTCCACCGGGTCGAGATATTCGGGTGATCCTTCAACCCCGGATATGGATTTCGAGGAGCTTGAGGGGAAGGCACCTTTGTCTATTCACTTGATTTGGATTATTGTAATATTGCAGTTTAATTTGGATGGTAAGTCTACGCATTATAAGGACACTTCTTTGTCTCACCTGTTTATTATGAACAATGTCCACTACATTGTTCAGAAGGTGAGAGGGTCTACTGAATTGAGGGAGATGATTGGTGATGATTATTTGAGGAAACTTACCGGGAAGTTCCGGCAGGCTGCTACTAGCTACCAGAGAGCAACTTGGGTGAGGGTGTTGTATTGTTTGAGAGATGAAGGGTTGCATGTGAGTGGTGGTTTTTCTTCGGGGGTGTCAAAGAGTGCTTTGAGAGAAAGGTTCAAGGCTTTTAATGCTATGTTTGAAGAGGTTCATAGGACTCAATGTGTTTGGTTGATACCGGATTCTCAACTCAGGGAAGAGCTCCGAATATCAATATCGGAGAAGCTGATACCAGCATATAGGTCATTTCTCGGGCGGTTCAGGTGCCACATAGAGAGTGGTAGACATCCGGAGAATTACATTAAGTATTCCGTTGAAGACCTGGAGGATGCTGTTTTGGATTTTTTTGAAGGAATCCCTGTTTCTCAGCACTTGAGGAGAAGATCTAATTGA 1875 0.4411 MDSSPPPMTPEKLPFSEAEKIILRWDSTASEEAREKMIFDGDRHEVDRYLQAVDEIQRSISSTSLSDDQNKVNSAVQIAMARLEDEFRNILISNTIPIEADSITEQEQEQQPPSSSSSSSSPVHHEAANDSNHCNDEANKLFRFNSEGTGSSVSVNSSYRSTSSIREIDLIPSEVVYDLRCIAERMISSGYLRECIQVYGSVRKSAVDASFRKLGIEKLSIGDVQRLEWEQLETKIRRWIRAAKVCVRTLFASEKKLCEQIFDGVGTCIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDIDLVFDSKSSDSIRVQAAEILSRLAEAARGILSEFENAVLREPSKVPVPGGTIHPLTRYVMNYISLISDYKMTLNELIVSKPSTGSRYSGDPSTPDMDFEELEGKAPLSIHLIWIIVILQFNLDGKSTHYKDTSLSHLFIMNNVHYIVQKVRGSTELREMIGDDYLRKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKAFNAMFEEVHRTQCVWLIPDSQLREELRISISEKLIPAYRSFLGRFRCHIESGRHPENYIKYSVEDLEDAVLDFFEGIPVSQHLRRRSN* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0555 624 MobiDBLite consensus disorder prediction 103 128 - -
Lan11g0555 624 Pfam Exo70 exocyst complex subunit 238 606 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lan11g0555 624 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 11 623 - -
Lan11g0555 624 MobiDBLite consensus disorder prediction 103 132 - -
Lan11g0555 624 Gene3D Exocyst complex component Exo70 106 620 - -
Lan11g0555 624 SUPERFAMILY Cullin repeat-like 17 611 IPR016159 -
Lan11g0555 624 PANTHER EXOCYST COMPLEX PROTEIN EXO70 11 623 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0555 Lan-Chr11 4320208 4322590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0555 15 623 EXO70 exocyst subunit family AT1G72470 70.779 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0555 K07195 - gmx:100808671 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0555 11 4320208 4322590 Lan9g1056 9 17760333 17762688 LSH