Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0544 ATGGATACTGAGGATGAAAATAGTAATACTGATAACCCTATGGAAAGTGTAAATAATGGGGTGGCAATTGAAGATGGGAATGGGGCTCAATGCTTTAAGTATAAAGCTGCGAATAGTGGGGTGGCAATTGAAAATGGGAATGGGGTTCGGTGCTTGAAGAATGAAACTGTAAATAATAGAGTGGCAATTGCTGATGGGAATGGTGTTGCAGAATGGAATACTGTTCGGTGCTTGAAGAATGAAATTATAAATAATGGAGTGGCAGTTTCTGGTCGGAATGGTGGTGCTGAAGGCCGAGAGGTTCAGTGCTTGAAGATTGAAACTGTAAATAATGGAATGGCGATTGGTGATGGGAATGGTTTTGCTGAAGGGAAAGAAGTTCAGTGTTTGAATAATGAAACTGTAAATAGCGGAGTAGTGATTGCTGATAGGAACAGTGTTTCTAAAGGGAAAGATGTTTGGTGCTTGAAGAACCAAACTGTTAATAATGGAATGGATATTGCTAGTGGGAAAGTTGTTGCCGAAGGGGACTCTGGTGGAGTTGTATATTTGCGAACTTATAAGAGGCGTAAAGATGTGAAATCAAGTTCAGAAAGCAAAGTTCAGGTAGGCAGCAAAGGATGTGTGGAAGCTGCAAGTCACCTATTAGATCAGGCTGTGAAAAAACCATGTGATGTAGCTGTAGGCAATCCTTCAAAAAATTATTCACATGGACATTGGCGAAATGTTGTGCTAAACGATTTATATCATTCATTAGGTGGTAGCAATGGCGGCATAGAGGGTTGCATAAGGGAAGCACTTATGAACTATCCCAAAACTAGTTGTGCCCCTACAGTTACAGAAAATTTTAAAATTGTCAAAGGTGGTCAAGAATGCTCTTCTCAATCTGAGCTGTTGTCTCACAGATTACAGAATGAAACTAATGGGCATGCAAATATCATGCATAATGGATGTTCTAGTAGATCAGATGGTCGTGGTGGTACTGAGAGGTGTCAGCGCGTGTTCTGTAATATCTTAACCTCTGAAAAATTCGGTTCATTATGTAAGGTGCTACTTGAAAATTTTCAAGGAATCAAACCTGAAAGGGTATTCGACTTTAGTGTCATAAACACAAGGATGAAAGAACACGCTTATGAACATTCGCCGACACTTTTCTTGTCAGATATTGAACAGGTTTGGAGAAAGCTTCAAGATACTGGAAATGAGATTGTTGCTATTACCAAGAGCCTGTCCGTCATGTCAAAAGCGTCCTACTGTGAGAAGGTTGGAGTTTCAGCGAACTGCTCATTCGAAGATGAAAAGCAAGTGTTGTATAACTGGGAATCCCGCTCTCAAACGAAAGCAGAGCAGAAAGAAGACTGTGCTGCATATAAAAGTTGCATTTGCAGGTATTGCGGAAAGAAGGCAGATGGTGCGGATTGTTTGGTTTGTGGTTCATGTGAGGAGGTATACCATGTTCCCTGTATTGAGCCTTCTGTCAAAGAAATACCCCACAAAAGCTGGTTCTGTGCCAATTGTTCTGGTAAGGGTATAGGATCTCCACATGAAAAGTGTGTGGTGTGTGAAAGGTTGAACGTCCCGAAGACCCTGAACAACATTTTTAGTGAGGAAAACATCCCTACAAATGAGGAAACATTGAATGTGGTGGAAGAGAATTCAAATTGTACTCATGATGATGGAATTCAAGTGTCCATAGGTGGGGAAAACTCACCTGAGTGCAAGATTTGTGAAGAAGGGGTGGATGGTGAAAAAATAAAAATATGTGCTCACCCTTTTTGCCCCAGTAAATACTACCATGTAAGGTGTTTGTCAAGTAAGCAGATGAAATTGTATGCTCAATGTTGGTACTGCCCTTCTTGTTTGTGCCGAGTTTGCCTCACTGATCAAGATGATGATAACATTGTTCTCTGTGATGGCTGTGATCATGCATACCACACCTATTGCATGAAACCTCCACGAACTTCTATTCCAAAAGGGAAATGGTTCTGCCGAAAATGTGATGCAGGGATCCAAGCAATACGGCGAGCAAAAAAGGCATATGAGAGTAAGAAGTGTAGAACAGATGGAAATGTTTCAAAGCTAAATGATGTCGAAGATGATAAGAGATGGAGCAATAAACGGGGCCGTGAATTAAACAAAGTTGGAGGAATGGACTTGCTTTTAACTGCAGCCAATACTCTGAATGTTGAAGAGAACTTGTCTGAAACCCAGATTGAGTCACGGAGAACATGA 2232 0.4099 MDTEDENSNTDNPMESVNNGVAIEDGNGAQCFKYKAANSGVAIENGNGVRCLKNETVNNRVAIADGNGVAEWNTVRCLKNEIINNGVAVSGRNGGAEGREVQCLKIETVNNGMAIGDGNGFAEGKEVQCLNNETVNSGVVIADRNSVSKGKDVWCLKNQTVNNGMDIASGKVVAEGDSGGVVYLRTYKRRKDVKSSSESKVQVGSKGCVEAASHLLDQAVKKPCDVAVGNPSKNYSHGHWRNVVLNDLYHSLGGSNGGIEGCIREALMNYPKTSCAPTVTENFKIVKGGQECSSQSELLSHRLQNETNGHANIMHNGCSSRSDGRGGTERCQRVFCNILTSEKFGSLCKVLLENFQGIKPERVFDFSVINTRMKEHAYEHSPTLFLSDIEQVWRKLQDTGNEIVAITKSLSVMSKASYCEKVGVSANCSFEDEKQVLYNWESRSQTKAEQKEDCAAYKSCICRYCGKKADGADCLVCGSCEEVYHVPCIEPSVKEIPHKSWFCANCSGKGIGSPHEKCVVCERLNVPKTLNNIFSEENIPTNEETLNVVEENSNCTHDDGIQVSIGGENSPECKICEEGVDGEKIKICAHPFCPSKYYHVRCLSSKQMKLYAQCWYCPSCLCRVCLTDQDDDNIVLCDGCDHAYHTYCMKPPRTSIPKGKWFCRKCDAGIQAIRRAKKAYESKKCRTDGNVSKLNDVEDDKRWSNKRGRELNKVGGMDLLLTAANTLNVEENLSETQIESRRT* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0544 743 PANTHER HISTONE ACETYLTRANSFERASE 244 731 - -
Lan11g0544 743 SUPERFAMILY FYVE/PHD zinc finger 451 507 IPR011011 -
Lan11g0544 743 MobiDBLite consensus disorder prediction 1 20 - -
Lan11g0544 743 Gene3D - 349 509 - -
Lan11g0544 743 SMART PHD_3 461 507 IPR001965 -
Lan11g0544 743 SMART PHD_3 622 667 IPR001965 -
Lan11g0544 743 SMART PHD_3 572 621 IPR001965 -
Lan11g0544 743 PANTHER D4, ISOFORM A 244 731 - -
Lan11g0544 743 ProSiteProfiles Zinc finger PHD-type profile. 459 509 IPR019787 -
Lan11g0544 743 Pfam PHD-finger 622 667 IPR019787 -
Lan11g0544 743 Pfam PHD-finger 461 507 IPR019787 -
Lan11g0544 743 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 568 672 IPR013083 -
Lan11g0544 743 ProSiteProfiles Zinc finger PHD-type profile. 619 669 IPR019787 -
Lan11g0544 743 SUPERFAMILY FYVE/PHD zinc finger 563 621 IPR011011 -
Lan11g0544 743 SUPERFAMILY FYVE/PHD zinc finger 621 673 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0544 Lan-Chr11 4227804 4233513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0544 621 684 C2H2 Transcription Factor Family AT3G01460 50.000 1.34e-14 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lan11g0544 PHD 2.3e-13 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0544 - - lang:109337790 1088.94