LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan11g0538	ATGTCGACCCAGAATCGTCGTTCATCGTTTTCATCTTCCACAGCGTCGTCTTTTGCAAAACGACATCCATCATCATCGTCGTTTTCGTCGCAGAATGTAGCTGCTAAGAAACGACCACCACTTACCAATGTCACTAATCACAGAACCACCGTTGCTTCTTCCCGTAACTCTACTTTGGTACCATGTTCAAATAAGATTGTCAAGACCAAGAAAGAAATTGATCCTCCTCCTTCAAGCACTACATCTTCTGCAAGTGGGAATAAATTACCCTCTTTGCAGAATGTTAAATCAAGCAAAGTTATTTTCTCTAAGGTCCCACAAAAGAATTATGCTGCCCCTGTCAATGTTCTTGTTCCAAGCAGAATTATTCATGTTTCTCCAAGTAAATCAGATGGGATGTCTGTTTCTATGAGTGATTCTATGTCTTCTTTTGATTCTATCAAGAGTCCTGAAGTTGAATATGTGGATAACACAGATGTTTCAGCTCTTGATTTAATTCAGAGAAAGGCATTCAGCAATCTCAACATTTCTGATACTACTACAGAATCACCAGGTAATATCTGCAGTAGAGACATAAATGTTGAGTTGGAAGGAGAGGATAAAATTATCAACATTGATAATAATTACATGGATCCACAGCTTTGTGCAACCTATGCTTGTGATATCTATAAACATCTCCGTGCATCTGAGTCAAAGAAGAGGCCTTCCATAGATTTCATGGAGAGAATTCAGAAGGACATAAATATCAGCATGCGCGCTATATTGCTCGACTGGCTTGTGGAGGTGGCTGAGGAGTATAGGCTTGTACCTGAAACATTGTATTTAACAGTGAACTACATAGATAGATATCTTTCAGGAAATGCTGTGAATAGGCAACAATTGCAATTACTTGGGGTTGCCTGCATGATGATTGCATCTAAATATGAGGAGATTTGTGCACCTCAAGTGGAAGAATTTTGTTTTATAACTGATAACACATACGTCAAAGAAGAGGTTTTGCAGATGGAATCTGCCATCTTGAATTATCTTAAGTTTGAAATGACAGCCTCAACAACTCACTGTTTCTTAAGACGATTTATTCGTGCAGCTCAAGATGTCAACGAGGTTCCTTCACTGCAAATGGAGTGCTTGACCAACTACATTGCCGAATTGTCGCTCTTGGAGTACAGTATGCTTTGTTATGCACCATCACTTATAGCAGCTTCAGCAATTTTCCTGGCTAAATTTATACTTTTCCCTTCAAAGAAACCATGGAATTCCAATTTACTGCATTACACGCAATACCGGCCTTCTGATTTGTGTCGATGTGTAAAGGATCTGCATCATCTTTGTTGCAGCAGATCCACTTCTAACCTACCTGCAATTCAAGAGAAATACAGTCAGCACAAATATAAGTATGTGGCGAAGAAGTACTGCCCTCCTTCGATACCTCAAGAATTTTTCATGAATTGA	1452	0.3926	MSTQNRRSSFSSSTASSFAKRHPSSSSFSSQNVAAKKRPPLTNVTNHRTTVASSRNSTLVPCSNKIVKTKKEIDPPPSSTTSSASGNKLPSLQNVKSSKVIFSKVPQKNYAAPVNVLVPSRIIHVSPSKSDGMSVSMSDSMSSFDSIKSPEVEYVDNTDVSALDLIQRKAFSNLNISDTTTESPGNICSRDINVELEGEDKIINIDNNYMDPQLCATYACDIYKHLRASESKKRPSIDFMERIQKDINISMRAILLDWLVEVAEEYRLVPETLYLTVNYIDRYLSGNAVNRQQLQLLGVACMMIASKYEEICAPQVEEFCFITDNTYVKEEVLQMESAILNYLKFEMTASTTHCFLRRFIRAAQDVNEVPSLQMECLTNYIAELSLLEYSMLCYAPSLIAASAIFLAKFILFPSKKPWNSNLLHYTQYRPSDLCRCVKDLHHLCCSRSTSNLPAIQEKYSQHKYKYVAKKYCPPSIPQEFFMN*	484

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan11g0538	483	SUPERFAMILY	Cyclin-like	211	347	IPR036915	-
	Lan11g0538	483	MobiDBLite	consensus disorder prediction	74	91	-	-
	Lan11g0538	483	Gene3D	-	235	348	-	-
	Lan11g0538	483	Pfam	Cyclin, N-terminal domain	221	347	IPR006671	-
	Lan11g0538	483	PANTHER	CYCLIN-A1-1	27	482	-	-
	Lan11g0538	483	CDD	CYCLIN	251	340	IPR013763	-
	Lan11g0538	483	SMART	cyclin_7	257	341	IPR013763	-
	Lan11g0538	483	SMART	cyclin_7	354	442	IPR013763	-
	Lan11g0538	483	PIRSF	Cyclin_A_B_D_E	1	479	IPR039361	-
	Lan11g0538	483	SMART	Cyclin_C_2	350	473	IPR004367	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan11g0538	Lan-Chr11	4181119	4184605	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan11g0538	4	483	Core Cell Cycle Gene Families	AT1G44110	62.140	0.0	557

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan11g0538	K06627		-	gmx:547781	644.039

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