Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0535 ATGTCGAAGTCTCCCTCCTCTCCCGAACAACAGCAGTCTATTTCTTCCTCTCCTTCTCAGCCTAGGGAATTTAATGAGGCAACAGGGATGGATGACCCAGAATCTACAATGGCGACAGTCGCTAATTTTGTGGAGCAATTGCATACCAACTTGTCATCACCACTTGAGAAAGAATTTATTACAGAATGCTTGCTGGGTATTTCCAGGAAAAGAAAGGATGCTAGAGCACTTATTGGTTCCCATGCACAAGCCTTGCCATTGTTCATAAACATTCTTAGAAATGGAACCCCCATTGCAAAAGTTAATGTTGCTGCCACTCTCAGTGTCCTGTGCAAAGATGAAGAGTTGAGGTTAAAGGTACTTCTAGGTGGTTGTATCCCACCATTACTGTCACTCTTAAAATATGAATCTACTGATGCCAGGAAGGCAGCAGCTGAAGCAATATATGATGTTTCCTCTGGTGGTCTTTTGGATGATCATGTTGGTATGAAGATTTTTGTTACAGAAGGTGTAGTTCCGACCTTATGGAATCAACTAAATCCAAAGAACAGGCAAGACAAAGTCGTGGAGGGTTTTATCACTGGAGCATTAAGAAATCTGTGTGGCGACAAAGATGGCTACTGGAAAGCAACATTAGAAGCTGGAGGTGTGGATATTATTGTGGGTCTCTTGTCTTCAGACAATGCTGTTTCTCAGTCAAATGCAGCTTCTCTATTGGCACGTTTGATGCTGGCTTTCAGTGATAGCATCCCCAAAGTAATAGACTCTGGAGCAGTCAAAGCATTACTTCAGCTTGTTGGTCAGGAAAACGATATTTCTGTACGAGCTAGTGCTGCTGATGCCCTAGAGGCCCTTTCTTCAAAGTCGATCAAGGCTAAGGAAGTTATTGTTAGTGCAGATGGTTTACCGATCCTTATTGGAGCTATAGTTGCTCCTTCTAAAGAGTGTATGCAAGGTGATGGAGGCCAGGCTTTACAGGAGCACGCAACTCGAGCTTTAGCCAATATATGTGGTGGTATGTCTGATTTAATACTATATCTTGGAAAACTGTCCTATTCTCCTCGTTTTTCTGCGCCTCTTGGTGATATAGTTGGTGCTCTTGCTTATACACTCATGGTCTATGAGGAAAAAGTTGATGTTGATGTGGAACACTTGGATGCAACTAAAGTAGAGGATATTCTAGTAACACTTTTAAAGCCTCGAGACAACATGCTGATTCAAGAACGTGTCCTCGAGGCTATGGCTAGCCTATATGGTAACATCTGTCTCTCGAAGTGGCTCAATCAGGCAGATTCAAAGAAGGTTCTTATTGGACTTATAACTATGGCTGCCACGGATGTGCAAGAATATCTAATACTTTCATTGACAAGCTTGTGTTGTGGTGAGGTAGGAATATGGGAGGCCATAAAAAAGAGAGAAGGTATCCAACTACTCATATCATTACTGGGATTGTCCAGTGAGCAGCATCAAGAGTACGCAGCTCAGTTGCTAGCAATCTTAACTAACCAGGTCGATGACTGCAAGTGGGCAATCACTGCTGCTGGAGGGATTCCGCCACTGGTGCAGTTGTTGGAGACAGGCTCACAGAGAGCAAGAGAGGAAGCAGCTAATATTTTATGGAGTTTGTGCTGTCACAGTGAAGATATTCGTGCTTGTGTTGAAAGTGCTGGGGCCATCCCGGCATTCTTGTGGCTGCTTAAGAGTGGTGGACCGAAAGGACAAGAAGCTTCTGCTATGGCACTCACAAAGCTTGTCCGAGTAGCTGATTCTGCCACAATTAATCAGCTATTAGCGTTGCTCCTAGGGGATTCTCCAAACTCAAAGGCCAATATAATACGAGTTCTAGGTCATGTACTTACTATGGCTTCAGCGAAGGATCTCCTGCAAAAGGGTTCTGCAGCTAACAAAGGCTTGAGATCTCTTGTTCAGGTTCTCAATTCGTCGAATGAGGAAACCCAAGAATATGCAGCTTCTGTCCTTGCTGATTTATTTATCGTTAGACAAGACATTTGTGATAGTCTCACAATTGATGAGGTTGTGCTTCCTTGCATGAAACTTCTGACTAGCAAAACTCAAGTTGTTGCCACTCAGTCAGCTCGAGCGTTAAGTGCTCTGTCCCGCCCAACCAAAAACAAAGCTGCAAATAAGATGTCTTATATTGTAGAGGGGGATGTCGAGCCACTGATCAAGTTGGCTAAAACATCCTCTGTTGATGCTGCTGAAACTGCTGTTGCTGCATTGGCCAATCTTCTATTTGATCCTCTTATTGCGGCTGAGGCTCTGGCTGAAGATATTGTTTCAGCTTTAATAAGAGTTCTAGCCAAAGGAACCTTCGAAGGTAAACAAAATGCATCTCGTGCGCTTCATCAATTATTGAAGCATTTTCCAGTAGGTGAAGTTCTTAAGGGGAATGCACAATGCCATTTCACGGTGCTTGCACTTGTTGATTCCTTAAGAGACATGGATATGGATGGAACTGATGCAGAAGATGCTTTAGATGTAATTGCTTTGCTAGCCAGGACCAAGCAGGGTGTCAACTTTACTTACCCTCCATGGTCGGCTCTGGCTGAAATACCATCAAGCTTTGAACCCCTTATCCGCTGCCTGTCTGAGGGCCCTCCCCTTGTGCAGGACAAGGCAGTTGAAGTTCTGTCTAGGCTTTGCAGAGATCAACCAGTCATACTTGGTGATATGTTATCTGCTAGTTCCAGGTCCATTGGTTCATTAGCTACTAGAATAATGAACTCCTCCAGTTTGGAAGTAAAAGTTGGTAGTGTTGCCTTACTAATTTGTGCTGCAAAGGAGAAGAAAGAGCTTTCAATGGATTTACTTGATGCTTCTGGGTTTCTAAAACCATTAATATGTTCTTTAGTTGATATGATGAAACAAAGTTCTAGCTGCTCTTCGTTAGAAATTGAGGCTCACGCTGCTAGAGGTTTTATGGAGAGAAATGCATTTCAAGAATTTGATGAGTTTGATATTCCTGACCCGGCTACGGTATTGGGAAGTAATGTTGCCATGTGGTTGCTCTCAATTATTGCTTCTTTCCATGTAAACAACAAACTCAGAATTATGGAAGCTGGCGGTCTCGAAGCTCTCTCCAGCAAACTTGCAAGACATACTTCAAATCCACAGGCGGAATATGAGGACACGGAAGGAATATGGATCAGTGCCTTGCTCTTGGCCATTTTATTTCAAGATGCAAATGTTGTTCTATCTCCTGCTACAATGCGAATTATACCTTCTCTGACTCTTCTGCTAAGATCGGATGAAATGATTGATAAGTATTTTGCTGCCCAGGCTATGGCTAGTCTTGTTTGTAATGGTAATAAGGGAATAGATCTTGCCATTGCAAATTCCGGTGCTGTTGCTGGATTGATAGCTATTATTGGGCATATAGAGTCAGATATGCCAAACCTGACAGGTTTATCAGAAGAATTCTCTTTGGTACAAAGCCCTGATCAAGTTGTTTTGGCTCACCTTTTTGAAATTGAAGATGTAAGAGTGGGATCTACTGCACGGAAATCTATACCACTCTTAGTGGATATCTTGAGACCAATACCAGAAAGGCCTAGTGCTCCACCAGTTGCTATTAGACTCTTGATATCCATTGCAAATGGAAGTGATACAAATAAATTAATTTTGGCTGAAGCTGGAGCTCTGGAAGCTTTGAATAAGTACCTGTCCTTGAGCCCTCAAGAATCAACTGAGGCTGCTATTTCTGAGTTATTGAGGATATTATTCTGCAATTCTGATATTGTTAAACATGAAGCATCAGCAAGTTCGTTGAACCAACTCATAGCTGTTTTACGTCTTGGATCAAGAAATGCTAGATATCATGCAGCAAGAGCACTTCATGAGCTTTTTGATGCCGAGAGCATCAGGAACTCAGAGTTAGCTAAGCAGGCCATTCAGCCGTTGGTTGACATGCTTAATACAACATCAGGGAGTGAGCAGGAGGCCGCTCTCTTGGCCTTGATCAAGTTAACCTCAGGAAATTCTTCAAAAGCATCTCTTTTTACTGATGTCGAAGGCAACCCACTTGAAAGTTTATACAGAATATTGTCTTCAACTGCTTCACCCTTGGAACTAAAGAGTCATGCCGCACAACTCTGCTTTGCTATTTTTGGTAATAGCAAAATCAGGGCAGATCCAATTGCTGCGGAATGCATAGAACCCCTTATATCACTGATGCACTCTGATTCTGGGACAGCAATTGAATCTGGGGTTTATGCTTTTGAGAGATTGTTGGAAGATGAACAACAGATAGAACTAGCAGCAGCCTATAATGTTGTGGATCTCCTTGTCAGCTTTGTTTTTGGTACAAACTATCCGCTTGTTGAGGCTACCATATCTGCTCTCATCAAATTGGGCAAAGATAGAACTCCGAGCAAACTAGACATGATCAGAGCTGGCATTATTGACAATTGTCTCAGCCTACTCCAATCAGCTCCTAGTTCATTATGCTCCACAATTTCGGAGCTGTTTCGCATTTTAACTAATAGTAACGCAATTGCTATGAGTTCAGATGCTGCAGAAATTGTAGAACCCCTTTTCCATGTTTTGCTCCGTCGAGATTTCAACTTATGGGGACAGCATAGTGCCTTACAAGCACTTGTAAATATATTGGAGAAGCCGCAAAGTCTTGCAACCTTGAAGCTTACTCCTAGCCAGGTTATTGAACCCTTGATTTCGTTTCTGGAATCCCCATCCCAAGCTATTCAGCAGCTTGGCACAGAACTTTTATCTCATCTTCTTGCACAAGAACATTTTCAGCAAGATATTACAACAAAGAATGCAGTTGTGCCCCTTGTACAGCTTGCAGGAATTGGAATATTAAACTTACAGCAAACAGCAATAAAAGCATTGGAAAAAATTTCCAAGAGCTGGCCAAAGGCTGTTGCTGATGCGGGAGGTATTTTTGAGCTTGCAAAGGTTATTATTCAAGATGACCCTCAGCCACCACATGCACTCTGGGAATCAGCTGCTTTAGTTCTCTCTAATGTATTACGTTCTAATGCTGATTACTATTTTAAAGTTCCTGCGGTGGTTCTTGTTAAAATGTTGCTCTCAACACGTGACAGTACGATTACCATTGCCCTTAATGCTTTAACAGTTCATGAAAGAAGTGATGCTACAAGTGCTGAACAGATGATGGAGGCTGGAGCTATAGATACACTGTTGGAGCTTTTAAGATCTCATCATTGTGAAGAAGCTTCTGCTAGATTACTTGAAGCTTTATTTAACAATGTGAGAGTACGAGAGATGAAGGTATCTAAGTATGCTATAGCGCCTTTATCACAGTATCTGTTAGATCCACAAACCAGATCACAGCCTGGCAAGCTTCTTGCTACTTTAGCCCTGGGAAATATTTCCCAGAACGAGGGACATGCTCGATACAGTGAGTCTGTTTCTGCATGTCGCGCATTAATAAGTTTACTTGAAGATCAATCAGCTGAAGAAATAAAAATCGTGGCTGTATGTGCATTGCAAAACTTTGTCATGAACAGCAGGACCAATAGACGAGCTGTTGCAGAAGCTGGGGGTATACTGGTGATCCAGGAATTGCTACTGTCTCCAAATATTGAAGTTGCTGGACAAGCAGCACTGCTGATCAAATTTTTGTTTTCTACCCACACACTGCAAGAATATGTGTCAAATGAGCTGATCAGATCCTTGACATCTGCACTGGGAAGAGAGTTGTGGTCGACTGCCACGATAAATGACGAGGTTTTGAAAACTCTGCATGTGATATTCATGAACTTCCCTAAGCTCCACATATCTGAAGCAGCAACCCTTTGCATTCCTCATTTGGTAGGGGCACTTAAATCTGGTGGTGAAGTGGCTCAGGACTCCGTGCTAGACACCTTTTTCCTGCTAAGACAATCTTGGTCAACTATGCAAATAGATATAGCAAAGTCTCAAGCTATGGTTGCTGCTGAAGCCATCCCCATCTTGCAAATGCTCATGAAAACCTGCCCACCAAGCTTCCATGAGAGAGCAGATGCTCTTTTGCACTGCCTACCAGGTTGCTTGACTGTCACCATTAAGCGTGGAAACAACCTCAAGCAAACTATGGGAAGCACAAATGCGTTTTGCCGGTTGACAATAGGCAATGGTCCTCCAAAACAAACTAAGGTAGTGAGTCATAGTACTTCTCCAGAATGGAAAGAAGGATTCACATGGGCATTTGATGTACCTCCAAAGGGCCAAAAGCTCCATATCATATGCAAAAGCAAGAATACTTTTGGCAAGTCAACTCTTGGAAGAGTCACTATTCAAATTGATAAAGTTGTGACAGAAGGGGTTTATAGTGGATTATTCAGCCTTAATCACGATGGCAACAAAGATGGTTCTTCCCGGACTCTTGAAATTGAGATTATATGGTCCAACAGGATTTCTAATGATGATATTTGA 6417 0.4248 MSKSPSSPEQQQSISSSPSQPREFNEATGMDDPESTMATVANFVEQLHTNLSSPLEKEFITECLLGISRKRKDARALIGSHAQALPLFINILRNGTPIAKVNVAATLSVLCKDEELRLKVLLGGCIPPLLSLLKYESTDARKAAAEAIYDVSSGGLLDDHVGMKIFVTEGVVPTLWNQLNPKNRQDKVVEGFITGALRNLCGDKDGYWKATLEAGGVDIIVGLLSSDNAVSQSNAASLLARLMLAFSDSIPKVIDSGAVKALLQLVGQENDISVRASAADALEALSSKSIKAKEVIVSADGLPILIGAIVAPSKECMQGDGGQALQEHATRALANICGGMSDLILYLGKLSYSPRFSAPLGDIVGALAYTLMVYEEKVDVDVEHLDATKVEDILVTLLKPRDNMLIQERVLEAMASLYGNICLSKWLNQADSKKVLIGLITMAATDVQEYLILSLTSLCCGEVGIWEAIKKREGIQLLISLLGLSSEQHQEYAAQLLAILTNQVDDCKWAITAAGGIPPLVQLLETGSQRAREEAANILWSLCCHSEDIRACVESAGAIPAFLWLLKSGGPKGQEASAMALTKLVRVADSATINQLLALLLGDSPNSKANIIRVLGHVLTMASAKDLLQKGSAANKGLRSLVQVLNSSNEETQEYAASVLADLFIVRQDICDSLTIDEVVLPCMKLLTSKTQVVATQSARALSALSRPTKNKAANKMSYIVEGDVEPLIKLAKTSSVDAAETAVAALANLLFDPLIAAEALAEDIVSALIRVLAKGTFEGKQNASRALHQLLKHFPVGEVLKGNAQCHFTVLALVDSLRDMDMDGTDAEDALDVIALLARTKQGVNFTYPPWSALAEIPSSFEPLIRCLSEGPPLVQDKAVEVLSRLCRDQPVILGDMLSASSRSIGSLATRIMNSSSLEVKVGSVALLICAAKEKKELSMDLLDASGFLKPLICSLVDMMKQSSSCSSLEIEAHAARGFMERNAFQEFDEFDIPDPATVLGSNVAMWLLSIIASFHVNNKLRIMEAGGLEALSSKLARHTSNPQAEYEDTEGIWISALLLAILFQDANVVLSPATMRIIPSLTLLLRSDEMIDKYFAAQAMASLVCNGNKGIDLAIANSGAVAGLIAIIGHIESDMPNLTGLSEEFSLVQSPDQVVLAHLFEIEDVRVGSTARKSIPLLVDILRPIPERPSAPPVAIRLLISIANGSDTNKLILAEAGALEALNKYLSLSPQESTEAAISELLRILFCNSDIVKHEASASSLNQLIAVLRLGSRNARYHAARALHELFDAESIRNSELAKQAIQPLVDMLNTTSGSEQEAALLALIKLTSGNSSKASLFTDVEGNPLESLYRILSSTASPLELKSHAAQLCFAIFGNSKIRADPIAAECIEPLISLMHSDSGTAIESGVYAFERLLEDEQQIELAAAYNVVDLLVSFVFGTNYPLVEATISALIKLGKDRTPSKLDMIRAGIIDNCLSLLQSAPSSLCSTISELFRILTNSNAIAMSSDAAEIVEPLFHVLLRRDFNLWGQHSALQALVNILEKPQSLATLKLTPSQVIEPLISFLESPSQAIQQLGTELLSHLLAQEHFQQDITTKNAVVPLVQLAGIGILNLQQTAIKALEKISKSWPKAVADAGGIFELAKVIIQDDPQPPHALWESAALVLSNVLRSNADYYFKVPAVVLVKMLLSTRDSTITIALNALTVHERSDATSAEQMMEAGAIDTLLELLRSHHCEEASARLLEALFNNVRVREMKVSKYAIAPLSQYLLDPQTRSQPGKLLATLALGNISQNEGHARYSESVSACRALISLLEDQSAEEIKIVAVCALQNFVMNSRTNRRAVAEAGGILVIQELLLSPNIEVAGQAALLIKFLFSTHTLQEYVSNELIRSLTSALGRELWSTATINDEVLKTLHVIFMNFPKLHISEAATLCIPHLVGALKSGGEVAQDSVLDTFFLLRQSWSTMQIDIAKSQAMVAAEAIPILQMLMKTCPPSFHERADALLHCLPGCLTVTIKRGNNLKQTMGSTNAFCRLTIGNGPPKQTKVVSHSTSPEWKEGFTWAFDVPPKGQKLHIICKSKNTFGKSTLGRVTIQIDKVVTEGVYSGLFSLNHDGNKDGSSRTLEIEIIWSNRISNDDI* 2139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0535 2138 Gene3D - 1164 1356 IPR011989 -
Lan11g0535 2138 Gene3D - 1357 1607 IPR011989 -
Lan11g0535 2138 SUPERFAMILY ARM repeat 196 460 IPR016024 -
Lan11g0535 2138 MobiDBLite consensus disorder prediction 1 33 - -
Lan11g0535 2138 CDD C2 2012 2102 - -
Lan11g0535 2138 Gene3D - 633 846 IPR011989 -
Lan11g0535 2138 SUPERFAMILY ARM repeat 36 800 IPR016024 -
Lan11g0535 2138 SUPERFAMILY ARM repeat 1560 2002 IPR016024 -
Lan11g0535 2138 Gene3D - 860 1142 IPR011989 -
Lan11g0535 2138 Gene3D - 362 632 IPR011989 -
Lan11g0535 2138 Gene3D - 1612 2008 IPR011989 -
Lan11g0535 2138 Pfam C2 domain 2011 2110 IPR000008 -
Lan11g0535 2138 Gene3D C2 domain 2010 2136 IPR035892 -
Lan11g0535 2138 Gene3D - 29 350 IPR011989 -
Lan11g0535 2138 SMART C2_3c 2011 2107 IPR000008 -
Lan11g0535 2138 PANTHER - 10 2136 - -
Lan11g0535 2138 SUPERFAMILY ARM repeat 859 1290 IPR016024 -
Lan11g0535 2138 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 257 300 IPR000225 GO:0005515
Lan11g0535 2138 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 515 557 IPR000225 GO:0005515
Lan11g0535 2138 Pfam Armadillo/beta-catenin-like repeat 505 543 IPR000225 GO:0005515
Lan11g0535 2138 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2009 2115 IPR035892 -
Lan11g0535 2138 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 10 2136 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Lan11g0535 2138 MobiDBLite consensus disorder prediction 1 24 - -
Lan11g0535 2138 SUPERFAMILY ARM repeat 1190 1548 IPR016024 -
Lan11g0535 2138 SMART arm_5 288 338 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 113 153 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 158 202 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 1419 1459 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 460 502 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 1837 1877 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 1290 1331 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 71 112 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 203 244 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 1750 1793 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 625 665 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 246 287 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 546 586 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 1711 1749 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 753 793 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 712 752 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 504 544 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 1208 1248 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 1794 1835 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 667 707 IPR000225 GO:0005515
Lan11g0535 2138 SMART arm_5 1546 1587 IPR000225 GO:0005515
Lan11g0535 2138 ProSiteProfiles C2 domain profile. 1991 2108 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0535 Lan-Chr11 4146045 4159518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0535 405 791 U-box Gene Family AT3G46510 23.645 4.02e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0535 - - gmx:100796864 3612.77