Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0532 ATGGAAATGGAACAGCTAGTGAGCATGGGTTTCCCTGAGGATTTAGCCGCCGAAGCCTTGGCTGCAACCGGCGGCGAATCCACCGTCAAAGCCACCGAATGGATTCTCTCTCACAAATCCTCCACTTCCCCACCTCCTAAATCTCAATCTAACCTCAACAACTTCTTCCTCTCTTCCTCAACCAAACGCCTCAAACCATCACCGTCACCCTCCATTCCCAACTCTTCTAAAACCAAACACTACAAACCCTTATACGAGCGGTTACGTCCTACCACCTTAGACGACGTCGTTGGTCAAGACCATCTCCTCTCTCCCAATTCTCTCCTACGCTCTTCCATCCACCGCAACCGCCTCCCTTCTATTCTTCTCTGGGGCCCACCCGGTACCGGTAAAACCACTCTCGCTAAAGCTATTGTAACTAACTCCAAATACCGTTTTGTTTCATTATCCGCCGTCACAAGCGGCGTTAAAGATGTTAGAGACGCCGTTGATGAAGCTAGGAAACTTAGACTCAAGACTGATCAAACCACTGTTCTTTTCGTCGATGAGGTTCATCGATTTAACAAGTCTCAACAAGATTCTTTCTTACCTGTTATTGAAGATGGTAGCATTGTGTTCATTGGTGCCACCACTGAGAACCCTTCTTTCCATTTGGTTACTCCGCTATTGTCGCGCTGTCGTGTCCTTACGCTTAATCCTCTTCAGCCTCGCCATGTTGCCGTGCTGATAAATCGCGCTGTTGATGACTTGGACAAGGGGTTAACTCAGAGTGTTGGATTTCGAGTTGGTGTTAATCAGGATGTGGTTGATTTCATAGCAAATAATTGCGATGGTGATGCTCGTGTGGCTTTGAATGTGTTGGAGATAGCTGCTGTTACTGCCGCTGCGAGGGTACAGCATAAAGAAGATGACACGACAATTGACGAATGCAGAGTTGTTGTTACACTTGATGATGCAAAGGAAGCACTTCAGAGCAAGCATCTTGCTTATGACAAAGACGGGGAGGAGCATTATAATTTGATTAGCGCGCTGCATAAGTCTATGAGGGGGAGTGATGCTGATGCAGCAATTTATTGGTTGGCGAGAATGTTAGAAGGAGGGGAGGAGCCTCTTTACATTGCGCGTCGACTCGTTAGGTTCGCGAGCGAGGATGTTGGTTTGGCTGATCCGTTAGCTCTGAGTCAGGCTGTTTCATGTTATCAAGCTTGTCATTTCATTGGAATGCCTGAGTGCAATGTCATTCTTTCACAATGTGTTGCTTACTTGGCATTGGCTCCAAAATCGGTTGCAGTTTATAAAGCAATTGGAGCTGCACAGAAGGTGGTAAGGGAATCGGTTGGACAGAATGAGGGAGTGCCTCTTCATCTAAGGAATGCACCAACCAAATTAATGAAAGAAGTTGGGTATGGGAAGGGATACATATACCCTCCTGATAATCCTAACACATCACAGACATACTTACCACCCTCACTTCAAGGCTACAAGTTTCTCCATTGGCCTCATAAGGATTCGTCTGACTAA 1521 0.4655 MEMEQLVSMGFPEDLAAEALAATGGESTVKATEWILSHKSSTSPPPKSQSNLNNFFLSSSTKRLKPSPSPSIPNSSKTKHYKPLYERLRPTTLDDVVGQDHLLSPNSLLRSSIHRNRLPSILLWGPPGTGKTTLAKAIVTNSKYRFVSLSAVTSGVKDVRDAVDEARKLRLKTDQTTVLFVDEVHRFNKSQQDSFLPVIEDGSIVFIGATTENPSFHLVTPLLSRCRVLTLNPLQPRHVAVLINRAVDDLDKGLTQSVGFRVGVNQDVVDFIANNCDGDARVALNVLEIAAVTAAARVQHKEDDTTIDECRVVVTLDDAKEALQSKHLAYDKDGEEHYNLISALHKSMRGSDADAAIYWLARMLEGGEEPLYIARRLVRFASEDVGLADPLALSQAVSCYQACHFIGMPECNVILSQCVAYLALAPKSVAVYKAIGAAQKVVRESVGQNEGVPLHLRNAPTKLMKEVGYGKGYIYPPDNPNTSQTYLPPSLQGYKFLHWPHKDSSD* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0532 506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 306 IPR027417 -
Lan11g0532 506 Gene3D - 234 309 - -
Lan11g0532 506 Pfam UBA/TS-N domain 4 35 IPR015940 -
Lan11g0532 506 Gene3D - 72 232 IPR027417 -
Lan11g0532 506 Pfam MgsA AAA+ ATPase C terminal 350 498 IPR021886 -
Lan11g0532 506 Pfam ATPase family associated with various cellular activities (AAA) 121 228 IPR003959 GO:0005524|GO:0016887
Lan11g0532 506 Gene3D - 428 505 - -
Lan11g0532 506 MobiDBLite consensus disorder prediction 59 83 - -
Lan11g0532 506 Gene3D - 324 427 - -
Lan11g0532 506 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 1 38 IPR015940 -
Lan11g0532 506 MobiDBLite consensus disorder prediction 59 78 - -
Lan11g0532 506 PANTHER WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER 16 503 - -
Lan11g0532 506 SMART AAA_5 117 234 IPR003593 -
Lan11g0532 506 Pfam AAA C-terminal domain 262 349 IPR032423 -
Lan11g0532 506 CDD HLD_clamp_RarA 234 324 - -
Lan11g0532 506 Gene3D - 2 40 - -
Lan11g0532 506 SUPERFAMILY post-AAA+ oligomerization domain-like 334 501 IPR008921 GO:0003677|GO:0006260
Lan11g0532 506 CDD AAA 97 227 - -
Lan11g0532 506 SUPERFAMILY UBA-like 3 41 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0532 Lan-Chr11 4128534 4130250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0532 83 350 Core DNA Replication Machinery Family AT1G77470 24.188 9.48e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0532 K07478 - gmx:100799257 758.059