Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0495 ATGAATCACTTACCTCGATTTTTCGGTCATAGAAAGGAACCTAAAAATACCATGGATTCCAAGAAGATTCGAAGAAAACCGAAGCTCGATCGCCGCAACGCTGTGAAGAATTTTGACTATGAAGGTGGTTCGGAAGATGTGAGTTCATCCGGTTCGGTTCTTTATACTCGATCGATGGATTTCTACGACCGGACTAGCTTTCGAGTCGAGGGCGTTGAGGGAGAGTTCGATCGGATTTGTCAGAGCCTCGGGCTATCTGGACCGGAAGATTTCTCGATCCCCGTCGCGGTGTGGGAGGCTATGAGGTTTCGTTCTTCTTCGGATGTTTTGCCGAGGCTGAAGCAGATTGAGTTGGAAGATGCGGAGAAAAATGAGGAAATTGAAGTGATGGGGGTTGAATTGAGTGATAAATTTGAAGATAAGGTTTCAATTAGGGACATTGGTGATTGTGTTCAAGCGGAGACTGCTGAGACCAGTGGTAGTTCCGGCGGAGGTATCAAGGGATTCCGCCCTCCGATGCTTAAACCGCCACCAGGAATTAGGATTTCGGCGATGGATAATGATTCGTCAACTTGGGACCTATTGAGGGATTTTGCTCCGCAAGGTGAAGGGGGAGAGACGGAGAATTCTGTATTGAATGGTGATGATAACGAAGTAGAAGAAGAAAAAGCAAAGGAGGAAGAAGAAGAAAAAGAGGAGTGTGGGAAGAGAGAAGAGGAAGAAAATGAAGCGAGATTTGTGGAGATTGTTGAGGAGAATGAAGCGAGATTTGCAGAGATTGTTGAGGAGCTTTCAGTTTCAGGGTCGTGTTCATTTACAACTTCGCATGAAGATGATTCATGTAGTAGTAGCACGGGTCCTAGGTCTAATAATATATCTCCTAATGAGAGATTTAGGCGCACTATCACCAATTGGCAAAAGGGTGATCTTTTGGGGCGTGGTTCCTTTGGGTCTGTCTACGAAGGAATTTCTGGAGATGGATTCTTTTTTGCTGTAAAGGAAGTTTCACTGCTAGATCAAGGGAGCCAGGGAAAGCAAAGTGTCTGTCAACTGGAGCAGGAGATCGCACTTTTGAGTCAGTTTGAACACGAGAATATAGTTCAATACTATGGCACAGAAATGGATGAATCAAATCTATATATCTTTATTGAGCTTGTAACGAAAGGTTCCCTTGCCAGCCTCTACCGGAGGTATAATCTTGGAGATTCCCAAGTATCATACTATACAAGACAGATTCTGCATGGTTTGAAGTATCTTCATGATCGAAATGTCGTTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTCAAGCTTGCCGATTTTGGATTGGCTAAGGCAACTGTCAAATTGAATGATATCAAATCATGCAAGGGAACATCATTCTGGATGGCCCCAGAGGTTGTAAAAAGAAAGAACCAAGGTTATGGGCTTCCAGCTGATATATGGAGTCTGGGATGCACTGTGTTGGAGATGTTGACTGGCAAAATTCCATACTCTCATTTCGAATGGATGCAGGCATTGTTTAGAATTGGAAAAGGTGAGCTACCTCCTGTTCCTGATTCTCTTTCACGAGATGCGCGGGATTTTATCCTGCAGTGTCTTAAAGTTAATCCAGATGATCGTCCCACTGCTGCTCAGCTCTTAAACCACTCATTTGTTCAAAGACCACTTTCCCAGTCCTCTGGCTCTGCATCTCCATATATTCCCAGAAGAAGGGTTTAA 1740 0.4397 MNHLPRFFGHRKEPKNTMDSKKIRRKPKLDRRNAVKNFDYEGGSEDVSSSGSVLYTRSMDFYDRTSFRVEGVEGEFDRICQSLGLSGPEDFSIPVAVWEAMRFRSSSDVLPRLKQIELEDAEKNEEIEVMGVELSDKFEDKVSIRDIGDCVQAETAETSGSSGGGIKGFRPPMLKPPPGIRISAMDNDSSTWDLLRDFAPQGEGGETENSVLNGDDNEVEEEKAKEEEEEKEECGKREEEENEARFVEIVEENEARFAEIVEELSVSGSCSFTTSHEDDSCSSSTGPRSNNISPNERFRRTITNWQKGDLLGRGSFGSVYEGISGDGFFFAVKEVSLLDQGSQGKQSVCQLEQEIALLSQFEHENIVQYYGTEMDESNLYIFIELVTKGSLASLYRRYNLGDSQVSYYTRQILHGLKYLHDRNVVHRDIKCANILVDANGSVKLADFGLAKATVKLNDIKSCKGTSFWMAPEVVKRKNQGYGLPADIWSLGCTVLEMLTGKIPYSHFEWMQALFRIGKGELPPVPDSLSRDARDFILQCLKVNPDDRPTAAQLLNHSFVQRPLSQSSGSASPYIPRRRV* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0495 579 SUPERFAMILY Protein kinase-like (PK-like) 285 565 IPR011009 -
Lan11g0495 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Lan11g0495 579 MobiDBLite consensus disorder prediction 1 30 - -
Lan11g0495 579 MobiDBLite consensus disorder prediction 272 297 - -
Lan11g0495 579 Pfam Protein kinase domain 306 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0495 579 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 62 572 - -
Lan11g0495 579 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Lan11g0495 579 Coils Coil 212 244 - -
Lan11g0495 579 Gene3D Transferase(Phosphotransferase) domain 1 302 573 - -
Lan11g0495 579 ProSiteProfiles Protein kinase domain profile. 305 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0495 579 SMART serkin_6 305 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0495 579 MobiDBLite consensus disorder prediction 1 24 - -
Lan11g0495 579 MobiDBLite consensus disorder prediction 199 242 - -
Lan11g0495 579 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 62 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0495 Lan-Chr11 3823889 3830581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0495 21 563 MAP Kinase Kinase Kinase AT4G08500 50.749 3.90e-176 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lan11g0495 Pkinase 5.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0495 K13414 - gmx:100819177 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0495 11 3823889 3830581 Lan14g0626 14 13209881 13216107 PCT
Lan14g0626 14 13209881 13216107 Lan11g0495 11 3823889 3830581 PCT