Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0481 ATGGGTTCAGTGCATCATACTGAGGTTTCCAGTATGAGAGAGCAAGGAGTCTTTAGTCTTGAGGATAATGGTCATTCAGAGAGGTCACAGTGGATGTTGGATTCTCCAAATCCACCACCTCTTTGGAAGAAGCTATTTAGTTCAGTTAAAGAGACTATCTTCCCTCATGGCAACAAGTTTTGCTTTTCAACCAAGAAGAAAACATGCCAAGGCCATGTTGTTTCATTCTTGCAAACTTTATTCCCTATCCTCAGTTGGTTGAGAAATTACAAAGCTTCCAAGTTCAAAGATGATTTGTTAGCTGGCTTAACTCTTGCCAGCTTAAGCATACCTCAGAGCATAGGATATGCTAATTTAGCGAAACTTGATCCTGAATATGGTCTTTATACCAGTGTTGTTCCTCCTCTTATTTATGCTATGATGGGGAGCTCAAGAGAAATTGCAATTGGACCTGTAGCTGTTGTGTCATTGCTGCTATCCTCCTTAGTTCAGAAAGTGGAAGATCCTGTTGCTAATCCTCATGCCTATAGAAATTTTGTCTTTACCGTGACCTTCTTCACCGGAATCTTTCAAACTGCATTCGGAGTTTTCAGGTTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCCTTAGTTGGATTCATGGCAGGAGCAGCCATCATTATTGGTCTTCAGCAGCTAAAGGGATTGCTTGGGATTAGTCACTTTACCACAAAAACTGATGCAGTATCAGTGTTGACATCTGTTTATAAGTCACTGCATCATCAAATTACTTCTGCAGAAAAATGGTGCCCTCTAAATTTTGTCCTGGGGTGTTCATTCCTGATCTTCCTTCTAATTACACGGTTTCTTGGAAGAAGAAACAAAAAGCTTTTCTGGTTGCCTGCTATCTCTCCTCTTCTATCAGTTGTAATATCAACTTCAATTGTGTATTTGTCTAAAGCTGATAAGCATGGAGTTAATATTATAAAGCATGTCAAAGGAGGCCTTAATCCAAGTTCAGCTCACCTGTTAGAATTCCATGGTGAACATGTTGGACAAGCAGCTAAAATCGGGTTGATTTGTGCAATTATCGCGCTTACTGAAGCTATAGCTGTTGGTCGATCTTTCGCTTCGATCAAAGGATACCACCTTGATGGCAACAAAGAAATGTTATCAATGGGATTCATGAACATTGTAGGATCTTTAAGTTCATGCTATGTGGCAACTGGTTCTTTCTCAAGAACAGCAGTAAATTTCAGTGCAGGATGTCAAACAGCAGTATCAAATATTGTGATGGCGATTACTGTGATTGTGTCACTTGAATTGTTTACAAGGCTCTTATACTATACGCCAGTGGCTATACTTGCTTCTATAATTCTCTCTGCACTTCCTGGATTAATTGACATAAGTGAAGCTTGTTATATCTGGAAGGTTGACAAATTAGATTTTCTTGCATGTGTTGGTGCTTTCCTTGGTGTCTTGTTTGCATCCGTAGAGATTGGTCTTATTGTTGCAGTAACAATCTCATTTGCAAAGATACTAATACAAGCAATTAGACCTGGGATAGAAGTCCTAGGTAGAGTTCCAAGAACAGAAGCATTCTGTGATGTTACTCAATACCCAATGGCCATAAGCACTCCAGGCATCATAGTGATTCGCATAAGCTCTGGCTCACTCTGCTTTGCAAATGCGAATTTTGTGAGAGAAAGAATTCTGAAGTGGGTCAGTGATGATGATGATATTAAAGCAACTTCCAAGGGAAGGGTCCAAGCAGTAATCCTAGACATGACAAACCTGATGAATGTTGATACTTCCGGAATTCTAGCACTAGAGGAACTACATAAGAGGTTGCTTTCACGTGGCGTAGAATTAGCTATGATCAACCCAAGGTGGCTAGTAATTCACAAACTTAAGCTTGCACACTTTGTGGACAAAATTGGGAAACAGTGGATTTTCCTTACTGTTGGAGAAGCAGTAGATGCATGTATCTCTTCTAAATTTGCTAGCGCTTGA 1995 0.4 MGSVHHTEVSSMREQGVFSLEDNGHSERSQWMLDSPNPPPLWKKLFSSVKETIFPHGNKFCFSTKKKTCQGHVVSFLQTLFPILSWLRNYKASKFKDDLLAGLTLASLSIPQSIGYANLAKLDPEYGLYTSVVPPLIYAMMGSSREIAIGPVAVVSLLLSSLVQKVEDPVANPHAYRNFVFTVTFFTGIFQTAFGVFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGISHFTTKTDAVSVLTSVYKSLHHQITSAEKWCPLNFVLGCSFLIFLLITRFLGRRNKKLFWLPAISPLLSVVISTSIVYLSKADKHGVNIIKHVKGGLNPSSAHLLEFHGEHVGQAAKIGLICAIIALTEAIAVGRSFASIKGYHLDGNKEMLSMGFMNIVGSLSSCYVATGSFSRTAVNFSAGCQTAVSNIVMAITVIVSLELFTRLLYYTPVAILASIILSALPGLIDISEACYIWKVDKLDFLACVGAFLGVLFASVEIGLIVAVTISFAKILIQAIRPGIEVLGRVPRTEAFCDVTQYPMAISTPGIIVIRISSGSLCFANANFVRERILKWVSDDDDIKATSKGRVQAVILDMTNLMNVDTSGILALEELHKRLLSRGVELAMINPRWLVIHKLKLAHFVDKIGKQWIFLTVGEAVDACISSKFASA* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0481 664 Gene3D STAS domain 513 659 IPR036513 -
Lan11g0481 664 Pfam Sulfate permease family 95 481 IPR011547 GO:0016021
Lan11g0481 664 PANTHER SULFATE TRANSPORTER 21 662 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan11g0481 664 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Lan11g0481 664 PANTHER SLC26A/SULP TRANSPORTER-RELATED 21 662 - -
Lan11g0481 664 Pfam STAS domain 534 652 IPR002645 -
Lan11g0481 664 ProSiteProfiles STAS domain profile. 550 656 IPR002645 -
Lan11g0481 664 SUPERFAMILY SpoIIaa-like 540 656 IPR036513 -
Lan11g0481 664 CDD STAS_SulP_like_sulfate_transporter 534 649 - -
Lan11g0481 664 TIGRFAM sulP: sulfate permease 82 652 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0481 Lan-Chr11 3677579 3681472 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0481 25 660 Inorganic Solute Cotransporters AT5G10180 64.006 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0481 K17469 - gmx:100776591 1136.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0481 11 3677579 3681472 Lan9g1107 9 18444225 18448285 LSH
Lan11g0481 11 3677579 3681472 Lan15g0834 15 17538526 17544240 PCT
Lan11g0481 11 3677579 3681472 Lan3g1575 3 27340988 27347428 PCT
Lan15g0834 15 17538526 17544240 Lan11g0481 11 3677579 3681472 PCT
Lan3g1575 3 27340988 27347428 Lan11g0481 11 3677579 3681472 PCT