Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0462 ATGGCTGATTCACTAACAGTTATGGTTGATTCTCCACCTAAACCTGAATTCCCTCCTGAAAAAGCACATAGGCAAAGAAAGTCCAATCAGGACCAAATAGCTACCCATGAGCCTGAACACTCTCCATCTACCATTCAAAAGGCTATTGCTGAGTTCGTAGGTACATACATTCTTATATTTGCAGGGTGTGGTGCTGCTCTTATTAACGAGACGTTGCCACTTACAATAGTAGGCATAGCTATGGTTGCGGGTCTAGCTTTGACAGTGGCTATTTATTCAGTTGGTCATGTTTCTGGTGGCCATTTCAATCCTGCAGTTACAATTGCTTTGGCAACAGTGCGAAAAATTCAATTGAAACTTGTACCTATTTATGTGTTGTGCCAGTTTATGAGTGCAACACTGGCCATCTTCACCCTCAAAGTGTTGTATCATGATAAGGTTGATATTGGAGTGACAGTGACTCAATTCACTAGTTCAACTTCTCACCTTGAAGCTTTGGTGTGGGAATTCATAATCACTTCTATACTGGTGCTCACTATTTGTGGTGTTGCCACTGATCATAGAGGGAGCAAAGACCTTGCAGGAGCTGCAATAGGCATTTCAGTTCTTATTAACGTCATCATTGCTGGGCCCATTACTGGAGCATCCATGAATCCTGCAAGGAGTTTAGGCCCTGCCATAGTCTCTGGTGTTTACAAAAACATTTGGGTTTATCTCATAGGCCCTACTCTGGGAGCTATCTTTGCAACTGTGCTTTACAAGTTCCTAAGGGTATCCAAACCAGCTAAACCTGAAGACCGCACATAA 807 0.4275 MADSLTVMVDSPPKPEFPPEKAHRQRKSNQDQIATHEPEHSPSTIQKAIAEFVGTYILIFAGCGAALINETLPLTIVGIAMVAGLALTVAIYSVGHVSGGHFNPAVTIALATVRKIQLKLVPIYVLCQFMSATLAIFTLKVLYHDKVDIGVTVTQFTSSTSHLEALVWEFIITSILVLTICGVATDHRGSKDLAGAAIGISVLINVIIAGPITGASMNPARSLGPAIVSGVYKNIWVYLIGPTLGAIFATVLYKFLRVSKPAKPEDRT* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0462 268 PANTHER MAJOR INTRINSIC PROTEIN 1 266 - -
Lan11g0462 268 CDD MIP 46 256 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan11g0462 268 TIGRFAM MIP: MIP family channel proteins 50 253 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan11g0462 268 MobiDBLite consensus disorder prediction 1 42 - -
Lan11g0462 268 Pfam Major intrinsic protein 41 253 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan11g0462 268 MobiDBLite consensus disorder prediction 16 34 - -
Lan11g0462 268 SUPERFAMILY Aquaporin-like 41 259 IPR023271 -
Lan11g0462 268 Gene3D Glycerol uptake facilitator protein. 14 267 IPR023271 -
Lan11g0462 268 PANTHER AQUAPORIN NIP2-1 1 266 IPR034294 -
Lan11g0462 268 PRINTS Major intrinsic protein family signature 46 65 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan11g0462 268 PRINTS Major intrinsic protein family signature 83 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan11g0462 268 PRINTS Major intrinsic protein family signature 120 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan11g0462 268 PRINTS Major intrinsic protein family signature 168 186 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan11g0462 268 PRINTS Major intrinsic protein family signature 199 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan11g0462 268 PRINTS Major intrinsic protein family signature 236 256 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan11g0462 268 ProSitePatterns MIP family signature. 101 109 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0462 Lan-Chr11 3482720 3484460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0462 41 263 Major Intrinsic Protein MIP AT5G37810 46.983 2.41e-63 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0462 K09874 - gmx:100798380 397.127