Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0461 ATGGATAAATTATGCTGTTTTAAGTCGTCTTTCTCTCAGCACGTATCAGCAAGATCTTCAACGAGCACTGGTAAGGGAAAAAATTATGAAGGGTCGATGAAGTATGGTTTCGCCCTAGTGAAAGGTAGAGCTAATCATCCAATGGAGGATTATCATGTTGCCAAGTTTGTGCAGATACAGGAGAAAGAATTGGGTTTATTTGCAATTTATGATGGTCATCTGGGAGACCGTGTGCCTGCTTACTTGCAGAAAAATTTGTTCTCCAACATTTTAAAGGAGGATAAATTTTGGGATGACCCTGCTGCATCTATTTCAAAAGCATATAAGAGCACAGATCGGGCAATTCTTTCACATAGTTCTGATTTGGGGCATGGTGGATCAACAGCTGTAACTGCAATATTAATCAATGGGCAAAGGCTATGGATAGCAAATGTCGGAGATTCACGCGCAGTTCTTTCCAGAAAAGGTCAAGCAGTACAAGTGACTGTAGATCATGAGCCCAACACAGAACGAGGAATCATCGAAAATAAAGGTGGTTTTGTCTCCAACTTACCAGGTGATGTGCCTAGAGTAAATGGGCAACTGGCTGTTGCTCGTGCATTCGGAGACAAGAGCCTCAAGTTACATTTGCGATCAGACCCCGATGTACAGAGTAATGATATAGATATTGATACCGATATTCTAATCCTTGCAAGTGATGGACTTTGGAAGGTGATGCCTAATCAAGAGGCAGTGGATATTGCTAGAAGGATAAGAGACCCACTGAAAGCAGCTAAGCAATTAGCAGCTGAAGCATTAAAAAGAGAAAGTAAAGATGATATATCTTGTGTGGTGGTTAGATTTAGGTGTTGA 852 0.412 MDKLCCFKSSFSQHVSARSSTSTGKGKNYEGSMKYGFALVKGRANHPMEDYHVAKFVQIQEKELGLFAIYDGHLGDRVPAYLQKNLFSNILKEDKFWDDPAASISKAYKSTDRAILSHSSDLGHGGSTAVTAILINGQRLWIANVGDSRAVLSRKGQAVQVTVDHEPNTERGIIENKGGFVSNLPGDVPRVNGQLAVARAFGDKSLKLHLRSDPDVQSNDIDIDTDILILASDGLWKVMPNQEAVDIARRIRDPLKAAKQLAAEALKRESKDDISCVVVRFRC* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0461 283 SMART PP2C_4 30 279 IPR001932 -
Lan11g0461 283 CDD PP2Cc 33 281 IPR001932 -
Lan11g0461 283 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 1 282 - -
Lan11g0461 283 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Lan11g0461 283 Gene3D - 29 283 IPR036457 -
Lan11g0461 283 SMART PP2C_SIG_2 45 281 IPR001932 -
Lan11g0461 283 SUPERFAMILY PP2C-like 30 282 IPR036457 -
Lan11g0461 283 PANTHER PROTEIN PHOSPHATASE 2C 1 282 IPR015655 GO:0004722|GO:0006470
Lan11g0461 283 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0461 Lan-Chr11 3473765 3481044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0461 1 282 PP2C-type Phosphatase Gene Family AT1G22280 70.486 4.99e-146 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0461 K17506 - gmx:100797292 470.314