Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0445 ATGATGTTGGAATTTGATGAATTTGACGATTCTGTCCCTCAACCTGACTCTGACCACGATTCCTCCTATCTCAATTTCGATCTCTTCTCTGCTCTCTCCAAACCCAAGGATTATTATAAAATACTGGAAGTGGATTATGATGCTACTGATGATACTATTCGCTCCAATTACATTCGTCTTGCTCTGAAATGGCACCCTGACAAACAAAAAGGCCATGATTCCGCAACCTCACGCTTTCAAGATATCAACGAGGCTTATCAAGTTTTGATTGATCCTGTCAAAAGGAGAGAATATGATAAAAATGGGATGCTTTATGTCTATGATTACAATATCATTGATTATCTTAACCGTTACAAGGGCCTTATCTTGACATGCAATGGCCTCGGCATGAAACATTCAATATGGTAA 408 0.3873 MMLEFDEFDDSVPQPDSDHDSSYLNFDLFSALSKPKDYYKILEVDYDATDDTIRSNYIRLALKWHPDKQKGHDSATSRFQDINEAYQVLIDPVKRREYDKNGMLYVYDYNIIDYLNRYKGLILTCNGLGMKHSIW* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0445 135 PRINTS DnaJ domain signature 39 57 IPR001623 -
Lan11g0445 135 PRINTS DnaJ domain signature 57 72 IPR001623 -
Lan11g0445 135 PRINTS DnaJ domain signature 74 94 IPR001623 -
Lan11g0445 135 PRINTS DnaJ domain signature 94 113 IPR001623 -
Lan11g0445 135 Pfam DnaJ domain 37 99 IPR001623 -
Lan11g0445 135 ProSitePatterns Nt-dnaJ domain signature. 79 98 IPR018253 -
Lan11g0445 135 SUPERFAMILY Chaperone J-domain 33 122 IPR036869 -
Lan11g0445 135 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 13 135 - -
Lan11g0445 135 CDD DnaJ 37 91 IPR001623 -
Lan11g0445 135 Gene3D DnaJ domain 29 112 IPR036869 -
Lan11g0445 135 SMART dnaj_3 36 94 IPR001623 -
Lan11g0445 135 ProSiteProfiles dnaJ domain profile. 37 102 IPR001623 -
Lan11g0445 135 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 13 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0445 Lan-Chr11 3274242 3277386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0445 30 99 C2H2 Transcription Factor Family AT1G74250 40.000 2.39e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0445 - - gmx:100804409 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0445 11 3274242 3277386 Lan9g1133 9 18699378 18701414 LSH