Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan11g0436 | ATGGGTGGTGCACCTTCTTTCATGCCATTATTCATCATCACCATCATTCTAATTCACCCCAACATTGCAAATGCCACTGATAATATCAGAGAAACTTCTCAAATTTCTAAACTTGATCGTGATGATGATAATGGTGGCATTGCCACCATATCACCCACGGTATCAACACATAATTATGATCATGATCACCAAGGTAAGAAATCAAAGGCATTGAAACCAAGCATAGTGATTGTGGTGTGTGTTTTAACCTCCGTTTGTTCCATCACCTTTATGATTCTTCTCTATATCAAACACTGCATTCGTGGTAACACCTCTTCAACTTCGAGAAACCTAAATAATTCCTCTGAGGAAAGAAAGAACTCTGGTGTTGAACGTTCCATGGTTGAATCATTACCCATTTTCAGATTTGGTTCTCTCAGGGGTCAAAAGGAAGGATTGGAATGTGCCATTTGTCTTAAGAGGTTCGAGGATCATGAGCTTCTTAGACTCCTCCCAAAATGCAACCATGCATTTCATGTTGAATGTGTTGACATGTGGCTTAACGAGCATTCAACTTGTCCTCTTTGTCGTGACAAGGTTGACCTAGAAGATATTGTTCTCATTGACCAACAACAACTTCCACCACCTTCATTGATACGTCATCAAAGCAATGCCCAAAATGAAGGATTTGATATTAACACCACACCGCAACCACTACCACGACCACAATTACACAATCCGAACCAAGTAATGTCTCGGAGACATTCATGGGTTGGGAAGAGTGACAATGGAATTATAGAAATTAGTCTAGAGGATATAGAAGAAACATCATCGCATAGAAGGTCATTGGATGATAGTGTGGTGAGGAGAATAGAGGGTAAGAGAAAAGATGGGAAATTGGCTACACATGAAAACAAGAGATCAAAGAAACGTGAGAAGGATCATAGGTTAGAGCACCGTATAATTGTATCTAGTCCCACTACAAAATCATCACAATGTCCTAATGTCTACCAAAAACGGTGGAGCAATATTGAACCGTGTGATTTGTTGTGCTTAACTCCAGATATGATTATTAGTGAAAATTATACAAGAACAGCATCATCATCATCCCAACAACAACATCAGAATAGAAGGGTGTCATTGCCATTCTTCATCCGAAACCAGAATGTTGAAGATGAAATGGAGAAAGGTGGGATGAATATGAATATGAATATGAGGACTGTTTCAGAGACAACAGGGATGAATGGGAATAGAGGGAGAGGGAGAGGGAGAGAGAGGGAAAAAGAGGAGGAGCGACAAGAGGGTGCAATTAAGAGGTGGTTGGCTTGGATTTCAAAAACACATTCTCAGTAA | 1332 | 0.4002 | MGGAPSFMPLFIITIILIHPNIANATDNIRETSQISKLDRDDDNGGIATISPTVSTHNYDHDHQGKKSKALKPSIVIVVCVLTSVCSITFMILLYIKHCIRGNTSSTSRNLNNSSEERKNSGVERSMVESLPIFRFGSLRGQKEGLECAICLKRFEDHELLRLLPKCNHAFHVECVDMWLNEHSTCPLCRDKVDLEDIVLIDQQQLPPPSLIRHQSNAQNEGFDINTTPQPLPRPQLHNPNQVMSRRHSWVGKSDNGIIEISLEDIEETSSHRRSLDDSVVRRIEGKRKDGKLATHENKRSKKREKDHRLEHRIIVSSPTTKSSQCPNVYQKRWSNIEPCDLLCLTPDMIISENYTRTASSSSQQQHQNRRVSLPFFIRNQNVEDEMEKGGMNMNMNMRTVSETTGMNGNRGRGRGREREKEEERQEGAIKRWLAWISKTHSQ* | 444 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan11g0436 | 443 | MobiDBLite | consensus disorder prediction | 412 | 427 | - | - | |
Lan11g0436 | 443 | SUPERFAMILY | RING/U-box | 136 | 195 | - | - | |
Lan11g0436 | 443 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 122 | 197 | IPR013083 | - | |
Lan11g0436 | 443 | MobiDBLite | consensus disorder prediction | 287 | 301 | - | - | |
Lan11g0436 | 443 | Pfam | Ring finger domain | 147 | 190 | IPR001841 | - | |
Lan11g0436 | 443 | CDD | RING-H2_EL5_like | 147 | 190 | - | - | |
Lan11g0436 | 443 | PANTHER | RING-H2 FINGER PROTEIN ATL43 | 53 | 442 | - | - | |
Lan11g0436 | 443 | MobiDBLite | consensus disorder prediction | 36 | 66 | - | - | |
Lan11g0436 | 443 | MobiDBLite | consensus disorder prediction | 287 | 310 | - | - | |
Lan11g0436 | 443 | SMART | ring_2 | 148 | 189 | IPR001841 | - | |
Lan11g0436 | 443 | ProSiteProfiles | Zinc finger RING-type profile. | 148 | 190 | IPR001841 | - | |
Lan11g0436 | 443 | MobiDBLite | consensus disorder prediction | 402 | 427 | - | - | |
Lan11g0436 | 443 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL42 | 53 | 442 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan11g0436 | Lan-Chr11 | 3204776 | 3206327 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan11g0436 | 68 | 436 | C3H Transcription Factor Family | AT5G05810 | 37.028 | 1.49e-60 | 201 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan11g0436 | K19041 | - | lang:109360354 | 842.802 |