Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0430 ATGCTAAGAATCAGAGCTCTACCACTTCCTCCTCCATTTCTAACCCTGACTACGACGATGCTGTCTCCGTCACCGTCGTCTTCCTCCGCCAACTCCGATACCAGAATACCCTCATTCCCAACACCCTCTTCTCGAAACCCCATCAACAGTTCCTCATTCCGTAATCTTCCTCTCTTCTCAAACTCTCAAGTTCAATCTCAAAGCATGGCCCTTTCGAAGTGTTTTTCTAACTCCACCAACCCTATCCCCATTTCGGGTGTACCTGAATCCGAATCCGATGATGGGTCTAACTCTCTTGTGGTGGTTTCTTTCTACAAGTTCGCGGATTTCCATGACCATGCTCGTTTGCGGAAACCATTGAAGGAACTCTGTCAAAAACTGCGTGTTTCTGGCGGCATTATTCTTGCACCTGAAGGAATCAATGGTAGCATATGTGGCACTTTGGAGTCGGTGGAGAAAGTTATTTCATTTATACAAAGTGATGATCGTTTGAAGGGGCTAAGACTAGTGGAATCGCCTGTCAGCCCAGAGGAGGAAGCCATCCACCATGGTCATAGTTCCAGTTCTCCTCTGGCTGCTGGGGAAGATGCACCCTTTCGATGGGATCATGTGAGGGTCAAGTTGAAGAAAGAGATTGTGACTCTTGGAATGCCTGATGTATCACCTATTGAAAAGGTTGGAAAGTATGTTGGCCCAAAAGATTGGAATGCTTTGATTACGGACCCAGACACTGTGGTGATTGATGTACGGAATAAATATGAAATCAGAATAGGAAAGTTTAAAGGAGCAGTTGATCCTTGCACTCCTTCATTTCGTGAATTCCCATCTTGGGTGGATGAGCATTTCCAGCTTAGCAGTACAGATGACGAGCGTTCAAAAGATGAAGTAGACAATTCAGTCCAAAGTGCTGAAAAAGTGATGGATAGTCCTAAACAACACATGCCGCGTGTTGCAATGTATTGCACTGGAGGTATTCGATGTGAGAAAGCTTCGAGTCTGCTTCTCAGCAAAGGTTTCAAAGAGGTTTTTCACCTGGAAGGTGGAATTCTGAAATATCTTGAGGAGGTTCCAGAGACAGAAAGCCTATGGGAGGGTGAGTGCTTTGTTTTTGACAAGCGAGTCTCTGTTGAGCATGGTTTGGTGCCAGGAAACTTCAAGCTCTGCTATGGTTGTAAGCAACCTGTGAGTGATGCCGACATGGAAGCCCAGGAATATGAATATGGAGTATCTTGCCCTTACTGTTTTTCACAGAAATCAGAGGAAGAGAAAGAGAGGGCTCGAGCTCGACAAAGACAGTTCGAGAGATGGGGAATCATCGGCGGTCCAGATAAGGGTCGGCGACCAACAAGCAAACCAGAGAGTGTTAGCCAGAAAACAAACCAGCTTTCACATTCTGTTTAA 1401 0.4575 MLRIRALPLPPPFLTLTTTMLSPSPSSSSANSDTRIPSFPTPSSRNPINSSSFRNLPLFSNSQVQSQSMALSKCFSNSTNPIPISGVPESESDDGSNSLVVVSFYKFADFHDHARLRKPLKELCQKLRVSGGIILAPEGINGSICGTLESVEKVISFIQSDDRLKGLRLVESPVSPEEEAIHHGHSSSSPLAAGEDAPFRWDHVRVKLKKEIVTLGMPDVSPIEKVGKYVGPKDWNALITDPDTVVIDVRNKYEIRIGKFKGAVDPCTPSFREFPSWVDEHFQLSSTDDERSKDEVDNSVQSAEKVMDSPKQHMPRVAMYCTGGIRCEKASSLLLSKGFKEVFHLEGGILKYLEEVPETESLWEGECFVFDKRVSVEHGLVPGNFKLCYGCKQPVSDADMEAQEYEYGVSCPYCFSQKSEEEKERARARQRQFERWGIIGGPDKGRRPTSKPESVSQKTNQLSHSV* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0430 466 CDD RHOD_YceA 227 354 - -
Lan11g0430 466 Pfam UPF0176 acylphosphatase like domain 100 212 IPR040503 -
Lan11g0430 466 SMART rhod_4 230 358 IPR001763 -
Lan11g0430 466 MobiDBLite consensus disorder prediction 18 50 - -
Lan11g0430 466 Pfam Rhodanese-like domain 233 354 IPR001763 -
Lan11g0430 466 MobiDBLite consensus disorder prediction 285 301 - -
Lan11g0430 466 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 209 387 IPR036873 -
Lan11g0430 466 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 96 447 IPR020936 -
Lan11g0430 466 MobiDBLite consensus disorder prediction 285 308 - -
Lan11g0430 466 ProSiteProfiles Rhodanese domain profile. 240 361 IPR001763 -
Lan11g0430 466 MobiDBLite consensus disorder prediction 425 466 - -
Lan11g0430 466 Gene3D - 214 394 IPR036873 -
Lan11g0430 466 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 96 447 - -
Lan11g0430 466 Gene3D - 88 213 - -
Lan11g0430 466 Hamap tRNA uridine(34) hydroxylase [trhO]. 97 398 IPR020936 -
Lan11g0430 466 MobiDBLite consensus disorder prediction 452 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0430 Lan-Chr11 3138995 3142996 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0430 60 460 Sulfurtransferasese or Rhodanese AT2G40760 71.605 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0430 - - gmx:100784854 667.151