Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0424 ATGAAGTTCCAATTTTCTGTTCTTGCATTTGTTCTTCTAAGATTCTTTGGCTTGATTATAGCTGACTTGAGTTCTGACAAACAAGCACTCCTTGAGTTTTCATCTAAAGTTCGACATGCTCCAAGGTTAAACTGGAATGATACAACTCCAATTTGCACTTCATGGGTTGGTGTTATTTGCAATTCAAATGGAACAAGTGTCATTGGTATCCATCTTCCAGGTATTGGACTCAAAGGCTCGATTCCGGATAACAGCATAGGAAAACTAGATTCACTTAGAATCCTTAGCCTTCATTACAATGGCCTTAGAGGAAATCTTCCTTCTGATGTTCTCTCCATTCCTTCACTCCAATATGTATTCCTTCAGTACAATAACTTCTCAGGTCCAATCCCTTCTTATGTCTCCCCTAAACTTATTGCATTGGATATTTCCTTTAACTCCTTCACTGGTAGTATTCCACCTACACTTCAGAACTTGAGAAGACTCACTCGGTTGTATCTCCAAAACAACGCCATCTCGGGAGCTATTCCTGAATTCAACCTTCCAAGGCTCAAATCTTTGAATTTGAGCTATAATAACTTAAATGGCTCAATTCCAACTTCCATCAGTAAGTTCCCGAATACTTCTTTTGTTGGGAACTCTCTCTTATGTGGATCACCTCTCGATGAGTGTCACGCAAATGCAATCACTCCTCCTCCATCTCCTTCTCCTGTTCATCAACCACTCTCTCCGGATACTACTCAAAATAAAAAGGCTACCACTTCTAAGAAAAGCTTTGGCCTAGCTTCTATACTTTCTCTAGTAATTGGAGGATTTGCCTTCTTCTCTTTCTTAGCTTTAATTGTTTCTATATGCTGTTTGAAGAGGAAAAACAACAAAAGAAGTGGTATACTAAAAGGGAAAGCTTCTTGTGCTGGAAAGAATGAGGTTTCAAAGAGTTTTGGGAGTGGTGTGCAAGCTGCTGAGAAGAACAAGTTGTTCTTCTTTGAAGGTTGTTCATATAGCTTTGACCTTGAAGATTTGTTAAAGGCTTCGGCTGAAGTTCTCGGAAAAGGGAGCTATGGAACAACATACAAGGCTTCTTTGGAGGAGGGAACAACAGTGGTTGTTAAAAGGATGAGGGAAGTTGTGGTTGGAAAGAAGGAGTTTGAGCAGCAGATGGAGATTGTGGAAAGAATTGGAAGGCACCCTAATGTTATGCCTCTTAGAGCTTATTACTATTCCAAAGATGAGAAACTTGTAGTTTACAACTACATGGTAGGAGGAAGCTTGTTTAACATGTTGCATGGGAACAGGGGTGCAGGAAGAATTCCATTAAACTGGGATTCAAGGATTAAGATTGCAATTGGAGCTGCAAAGGGAATTGCCTTCATCCATTCAGAGGGTGGTCCAAAGTTCACTCATGGCAACATCAAGTCATCCAATGTTCTCATAACCGAAGAACATGATTGTTGCATCACTGATGTAGGACTAACTCCTCTAATGAACACTCCACCAACAACATTGTCAAGAGCCAATGGTTATCGCGCTCCTGAAGTAACCGAGCCCAAGAAGATCACTCATAAGTCAGATGTATACAGCTTTGGGGTGATCCTTCTTGAAATGCTTACAGGAAAGACTCCATTGGGATATCCTGCATATGACAATGACATGGTTGATCTTCCAAGGTGGGTAAGGTCTGTGGTTCGCGAGGAATGGACAGCCGAAGTTTTTGATGAGGAGTTGCTAAGAGGGCAATATAATGAAGACGAGATGGTGCAGATGCTTCAGATTGCCCTTGCTTGTGTGGCAAAGGTGGCAGATAATAGGCCTACAATGGAAGAAGCTGTTAGAACTATAGAGGAAATTAGGCAGCCCGAGTTGAAGAACCGTACTTCGTCCGAGTCTGAATCTAATGTACAAACACCATGA 1911 0.4134 MKFQFSVLAFVLLRFFGLIIADLSSDKQALLEFSSKVRHAPRLNWNDTTPICTSWVGVICNSNGTSVIGIHLPGIGLKGSIPDNSIGKLDSLRILSLHYNGLRGNLPSDVLSIPSLQYVFLQYNNFSGPIPSYVSPKLIALDISFNSFTGSIPPTLQNLRRLTRLYLQNNAISGAIPEFNLPRLKSLNLSYNNLNGSIPTSISKFPNTSFVGNSLLCGSPLDECHANAITPPPSPSPVHQPLSPDTTQNKKATTSKKSFGLASILSLVIGGFAFFSFLALIVSICCLKRKNNKRSGILKGKASCAGKNEVSKSFGSGVQAAEKNKLFFFEGCSYSFDLEDLLKASAEVLGKGSYGTTYKASLEEGTTVVVKRMREVVVGKKEFEQQMEIVERIGRHPNVMPLRAYYYSKDEKLVVYNYMVGGSLFNMLHGNRGAGRIPLNWDSRIKIAIGAAKGIAFIHSEGGPKFTHGNIKSSNVLITEEHDCCITDVGLTPLMNTPPTTLSRANGYRAPEVTEPKKITHKSDVYSFGVILLEMLTGKTPLGYPAYDNDMVDLPRWVRSVVREEWTAEVFDEELLRGQYNEDEMVQMLQIALACVAKVADNRPTMEEAVRTIEEIRQPELKNRTSSESESNVQTP* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0424 636 SUPERFAMILY L domain-like 42 220 - -
Lan11g0424 636 PANTHER RECEPTOR-LIKE KINASE 5 635 - -
Lan11g0424 636 Gene3D Ribonuclease Inhibitor 24 136 IPR032675 -
Lan11g0424 636 ProSiteProfiles Protein kinase domain profile. 343 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0424 636 Gene3D Transferase(Phosphotransferase) domain 1 419 635 - -
Lan11g0424 636 MobiDBLite consensus disorder prediction 617 636 - -
Lan11g0424 636 Pfam Leucine Rich Repeat 137 159 IPR001611 GO:0005515
Lan11g0424 636 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Lan11g0424 636 Gene3D Ribonuclease Inhibitor 137 226 IPR032675 -
Lan11g0424 636 MobiDBLite consensus disorder prediction 228 251 - -
Lan11g0424 636 Pfam Protein kinase domain 347 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0424 636 ProSitePatterns Protein kinases ATP-binding region signature. 349 380 IPR017441 GO:0005524
Lan11g0424 636 Pfam Leucine Rich repeats (2 copies) 161 199 IPR025875 -
Lan11g0424 636 SUPERFAMILY Protein kinase-like (PK-like) 347 613 IPR011009 -
Lan11g0424 636 PANTHER OS05G0588300 PROTEIN 5 635 - -
Lan11g0424 636 Gene3D Phosphorylase Kinase; domain 1 309 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0424 Lan-Chr11 3106471 3110454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0424 10 634 Receptor kinase-like Gene Family AT5G58300 58.544 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan11g0424 Pkinase 4.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0424 - - aprc:113868460 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0424 11 3106471 3110454 Lan3g0762 3 14198443 14203092 PCT
Lan3g0762 3 14198443 14203092 Lan11g0424 11 3106471 3110454 PCT