Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0412 ATGGATTTCTTACACTGTTTCTTCTGCATATTTTGGATAATCAATTTTCTAGCCTCCATAAATCAATACCATGTTGCAGTTTGTTCAGCTAGTGATTTTCCAAATCCAATTAATGTGACAAAGCACTTTTCCTTCCCTGATTTCAGCTTCACCAATAACCCAAGACTTGTACATGATGTGAAGCTCCTAGGCAGTGCCAAGTTCTCAAATGAAAAGGGTGCTCTTCAAATTCCAAATGAATCACAAGACACTGATATAAGACACCAAGCAGGTAGAGGAATCTATTCCTTCCCAATCCGTTTACTAGATCCAAGTACAAAGACTCCAGCTTCTTTTGAAACCACTTTTTCTTTCCATTTCAACAATTCCACTATAAATCAAACTGATTATGATGGTGGTAGTAGTGGCCTAACTTTCATCATAGTCCCTGATGAGTTCACTGTGGGAAGGTCAGGGCCTTGGCTTGGAATGCTAAATGATGCTTGTGAGAATGATTACAAGGCAGTGGCAATAGAGTTCGACACTCGAATGAACCCAGAATTCGGAGATCCAAATGACAACCATGTTGGCATCAATTTAGGTACCATAGTATCTACTAAAACTATCAATGTTTCTGGTGTTGGAGTGTCCCTTAAGGATGGTTTTGTTCACCATGCATGGATCACCTATGATGGTCCTAATAAAAGATTGGACATTCGTTTAGGACTACCAAACCAGGAAGTTTATCCTTCTAAGCCTATCTTTTCAGAATCAATAGATCTCTTTCCATATCTCAATGAGTACATGTTTGTAGGGTTCTCAGCTTCCACAGGTAACCATACTCAAATCCACAACATACTCTCTTGGAACTTCACTTCCACCAGCCAAGCTTTTCTTCGCTTCCCTTCGTCCGAAACTTGCCAGGGTAAGGTCTTACTTCAGAATAGCAGAACAGAAGAAGAACCTGCCAAAAAGTCTAGTAAGGATAAAACTCCACAGAGTTTTTTGATTTTTGTGGCTGTAGTGGCACTGGTTCTGGCTGTTCTCATTGGTTTTTACTTTATCAATAAGTATAGAAGAAATGCAGCCAAATCAAAGAATTCATTGGAAGTAGAAATTCGCCGGCCTAGACCTCCAAACAAACCGCGCCGCTTCTCATTCTCCGAATTTTCCTCAGCAACTAGATCATTCAGTGAGATAGAGTTGCTTGGTGGTGATTCTAGAGGAGAGTACTATAGGGGAAAGCTTTCAAATGGAAGCAATGTAGCAGTGAAAAGATTCTCAGCTCAGTTTCTCAACACACATGGATCAGATAGGAAACGTTTGTTGAAGGAAATCAAAACCATTTGCCAAGCTCGCCACCCGAATTTGCTTCCTGTCAAAGGCTGGTGCCAAGATAACAATGAAGTCATGGTGGCCTATGAATTTGTCCACAATGGCAGCCTAGATAAATGGCTATTTGGTGCTGGTGTTCTTCCATGGACGCGACGTTTCAAGGTTATCAAAGATGTAGCCGATGGATTGAACTTCCTTCACACAAAGCAACTAGCCCACAAGAACTTAAAATGTAGCAGTGTGTTTCTAGATGTTAGTTTTAGAGCTGTTTTGGGTGATTTTGGGTTTGTGCTATTAGGGGCAGAATCAAAACAGTTTGAGTCATTAGTGTGTCATGGTGCTGATGTGTTTGAATTCGGTGTCCTTGTTCTAGAAGTAATAGCTGGAAGGAGAAGGGTGGAAGGGGAGATAGAAGAGTTAAAAGCAGAAGAGAAGAACTTATTGGATTTTGCTTGGAACTTGCATGAGACTAATGACAAAGTGAAGTTGGTGGATAGAAGGATGGGAGCATTGATCAACTTGGATCAGGCGAATCGTGTTCTTGAAATTGGATTGCTTTGCACTTTGAATGAGAACAAAGGGAGGCCTTCTATGGAGGAAGTGGTGGAGTTTCTTCTTAACATGGATAAGCCTATTCCTAAGCTTCCAGCAACTCGCCCTGTTGCTTTGTTCCCCTATAACAGCGCCAACACTGGACTCTGCAATACATACTCTTGTACTTTTAAGTGA 2043 0.4112 MDFLHCFFCIFWIINFLASINQYHVAVCSASDFPNPINVTKHFSFPDFSFTNNPRLVHDVKLLGSAKFSNEKGALQIPNESQDTDIRHQAGRGIYSFPIRLLDPSTKTPASFETTFSFHFNNSTINQTDYDGGSSGLTFIIVPDEFTVGRSGPWLGMLNDACENDYKAVAIEFDTRMNPEFGDPNDNHVGINLGTIVSTKTINVSGVGVSLKDGFVHHAWITYDGPNKRLDIRLGLPNQEVYPSKPIFSESIDLFPYLNEYMFVGFSASTGNHTQIHNILSWNFTSTSQAFLRFPSSETCQGKVLLQNSRTEEEPAKKSSKDKTPQSFLIFVAVVALVLAVLIGFYFINKYRRNAAKSKNSLEVEIRRPRPPNKPRRFSFSEFSSATRSFSEIELLGGDSRGEYYRGKLSNGSNVAVKRFSAQFLNTHGSDRKRLLKEIKTICQARHPNLLPVKGWCQDNNEVMVAYEFVHNGSLDKWLFGAGVLPWTRRFKVIKDVADGLNFLHTKQLAHKNLKCSSVFLDVSFRAVLGDFGFVLLGAESKQFESLVCHGADVFEFGVLVLEVIAGRRRVEGEIEELKAEEKNLLDFAWNLHETNDKVKLVDRRMGALINLDQANRVLEIGLLCTLNENKGRPSMEEVVEFLLNMDKPIPKLPATRPVALFPYNSANTGLCNTYSCTFK* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0412 680 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2-LIKE 37 661 - -
Lan11g0412 680 Gene3D Transferase(Phosphotransferase) domain 1 547 650 - -
Lan11g0412 680 SUPERFAMILY Concanavalin A-like lectins/glucanases 42 288 IPR013320 -
Lan11g0412 680 Gene3D Phosphorylase Kinase; domain 1 361 469 - -
Lan11g0412 680 SUPERFAMILY Protein kinase-like (PK-like) 371 643 IPR011009 -
Lan11g0412 680 Pfam Legume lectin domain 42 289 IPR001220 GO:0030246
Lan11g0412 680 CDD lectin_legume_LecRK_Arcelin_ConA 42 287 IPR001220 GO:0030246
Lan11g0412 680 Gene3D Transferase(Phosphotransferase) domain 1 470 546 - -
Lan11g0412 680 Gene3D - 40 287 - -
Lan11g0412 680 ProSiteProfiles Protein kinase domain profile. 390 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0412 680 Pfam Protein tyrosine and serine/threonine kinase 394 535 IPR001245 GO:0004672|GO:0006468
Lan11g0412 680 PANTHER - 37 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0412 Lan-Chr11 3017367 3019707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0412 29 662 Receptor kinase-like Gene Family AT5G55830 31.101 2.22e-89 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan11g0412 Lectin_legB 3.6e-56 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0412 - - gmx:100807767 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0412 11 3017367 3019707 Lan9g1504 9 21624795 21627205 LSH