Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0410 ACTTTCACCCAAAAACCCGATCCAACGGGTATATCCGAACCCAATCCCTTACCATGTTATCCTTTCTCACTATCGCGACAAGAAGCTGAAGAACTGATACTTCAACACTGCCTCCTCAATCTACTATTCAATGGTGCTTATTTAACATTGACCCTTGACATTAATAAAGTAATATACTTTTCTAGTGGCATTACAAGACCTAGTTTTTTGTTTTCTCAGTTAGCAATGCCTGTCCTAACATTTGGTCATTCTAAGTTGAGTGCTGCTACCTTACCATGTAACTGTGTGAGAAGGGTGAGATTGATTACTAGGCTTCAGTATTCTGTTGCTGATAGAACATCAATGACTTCTGGTTCTGCATTGGAACTGGATTCCGGTCGAGTGAGTAGGAAGCGGGGAGGGTCCTCCTCGTCGTTATATACTCTTCCTGGTTTAGAAGAAAGGAAGAAAGATAAGGAGGTGATGCGCAAAAAGGTTTATAAGTTCTTGCAGGGTATTGGCATTGTTCCTGAGGAACTTGATGGTCTTGATCTTCCTGTTACAGTTGATGTTATGAGGGAGCGCATTGATTTTCTTCACAATTTGGGGCTTACAGTTGAAGACATTAATAACTATCCACTTGTTCTCGGCTGCAGTGTCAAGAAGAATATGGTTCCTGTGCTTGATTACCTTGGTAAATTGGGAGTCAGAAAATCCACATTCACTCAATTCTTGCAGAGATACCCCCAAGTACTCCATGCTAGTGTTGTTGTGGATCTTGATCCTGTGGTGAAGTATCTTCGAGGGATGGATATCAAGCCTGAAGATATTCCTCGTGTTCTTGAGAGCTACCCTGAAGTGTTAGGTTTCAAACTTGAAGGAACCATGAGCACGTCTGTTGCTTATTTGATTGGAATTGGTGTAGGAAGAAGAGAAATTGGAGGGGTCTTAACAAGATACCCGGAGATTTTAGGGATGAGAGTTGGTAGAGTCATCAAGCCTTTTGTAGACTTTATGGAAAACTTGGGAATTCCAAGATTAGCTACTGCTAGATTGATAGAGAAGAAACCTTATATACTTGGATTTGGATTGGAAGAGAAGGTGAAGCCAAATGTGAAATCCCTTGAAGAGTTTAATGTAAGGAGAACATCACTTGCCTCTATAATTGCTCAGTATCCTGACATTGTTGGAACTGACTTAAAGCAAAAGCTTGGCAATCAGAGAAGTTTACTCAATTCTGTACTCGATTTGGATCCTGAGGATTTTGGCAGAGTTGTTGAGAAGATGCCACAGGTTATTAGTCTCAGTAGAGGACCTGTTCAGAAGCATATTGATTTTCTCAAGGATTGTGGGTTTTCTATGCAACAAATGAGGAAGATGATTCTTGGATGCCCTCAACTACTTGCATTAAACATTGACATCATGAAACCTAGCTTTGATTACTTCCGAATGAAGATGAAACGGCCTTTGGAAGACTTGGTTACTTTCCCAGCATTCTTTACTTATGGTCTGGAGTCAACTGTAAAACCTAGGCATAAGATGGTTACCAAGAAAGGATTGAAGTGTTCTCTTGCATGGATGCTTAATTGCTCTGATGAGAAATTTGAGCAACGAATGGACTATGACACAATTGACATGGAAGAGATGGAAAAGGAACCATCATTTGACATGAATTCACTGATGCAACCAAGGGCTGGTGAATCAGATTCTGATTATGAAGACAGTGATGATGATATCGATTAG 1722 0.4048 TFTQKPDPTGISEPNPLPCYPFSLSRQEAEELILQHCLLNLLFNGAYLTLTLDINKVIYFSSGITRPSFLFSQLAMPVLTFGHSKLSAATLPCNCVRRVRLITRLQYSVADRTSMTSGSALELDSGRVSRKRGGSSSSLYTLPGLEERKKDKEVMRKKVYKFLQGIGIVPEELDGLDLPVTVDVMRERIDFLHNLGLTVEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTFTQFLQRYPQVLHASVVVDLDPVVKYLRGMDIKPEDIPRVLESYPEVLGFKLEGTMSTSVAYLIGIGVGRREIGGVLTRYPEILGMRVGRVIKPFVDFMENLGIPRLATARLIEKKPYILGFGLEEKVKPNVKSLEEFNVRRTSLASIIAQYPDIVGTDLKQKLGNQRSLLNSVLDLDPEDFGRVVEKMPQVISLSRGPVQKHIDFLKDCGFSMQQMRKMILGCPQLLALNIDIMKPSFDYFRMKMKRPLEDLVTFPAFFTYGLESTVKPRHKMVTKKGLKCSLAWMLNCSDEKFEQRMDYDTIDMEEMEKEPSFDMNSLMQPRAGESDSDYEDSDDDID* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0410 573 Pfam mTERF 221 529 IPR003690 GO:0003690|GO:0006355
Lan11g0410 573 PANTHER CGI-12 PROTEIN-RELATED 99 559 IPR003690 GO:0003690|GO:0006355
Lan11g0410 573 SMART mt_12 199 230 IPR003690 GO:0003690|GO:0006355
Lan11g0410 573 SMART mt_12 451 482 IPR003690 GO:0003690|GO:0006355
Lan11g0410 573 SMART mt_12 379 411 IPR003690 GO:0003690|GO:0006355
Lan11g0410 573 SMART mt_12 271 302 IPR003690 GO:0003690|GO:0006355
Lan11g0410 573 SMART mt_12 235 266 IPR003690 GO:0003690|GO:0006355
Lan11g0410 573 SMART mt_12 307 338 IPR003690 GO:0003690|GO:0006355
Lan11g0410 573 SMART mt_12 416 446 IPR003690 GO:0003690|GO:0006355
Lan11g0410 573 SMART mt_12 343 374 IPR003690 GO:0003690|GO:0006355
Lan11g0410 573 SMART mt_12 483 514 IPR003690 GO:0003690|GO:0006355
Lan11g0410 573 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC 99 559 - -
Lan11g0410 573 Gene3D Transcription termination factor 3, mitochondrial 322 537 IPR038538 -
Lan11g0410 573 Gene3D Transcription termination factor 3, mitochondrial 149 251 IPR038538 -
Lan11g0410 573 MobiDBLite consensus disorder prediction 544 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0410 Lan-Chr11 3000192 3002415 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan11g0410 mTERF 3.2e-106 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0410 K15032 - gmx:100785223 794.267