Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0406 ATGGGTGAGGGAGAGAGAGCAAAACCAAAAGAGGAACAACAACAACAACATCATCATGAAGAAGAAGAAGAAGAAGAAGGTTCATTATTTGTAGAGTCTTCTTCAAGATGGAACAATCAGGGGTTTCAGATTCTGCAATTATCAGAGAAACTCATCAATGCAAACCTCAGCACCAAAATAGAAGCTGCCAGAGAAATCAGAAAACTTATTCGAAAATCACCTTCTTCTGCTAAAACCCGCTCCAAGTTTGGTGCTTCTGGTGTTATTCAACCCCTTGTTTTTATGCTCTCTTCTTCCAACCTTGATGCTCGTCAATCTTCCCTCCTTGCCCTTCTCAACCTCGCTGTTCGTAATGAACGAAACAAGGTCAAGATAGTGACAGCTGGTGCTGTTCCTCCTCTGGTGGAGCTTCTCAAGAGGCAAAATAGCAGTATAAAGGAATTAGCAACAGCGGCAATCTTGACACTCTCAGCTGCTGAACTCAACAAGCCTATTATTGCTGCTTCTGGAGCTGCACCTCTCCTTGTTCAGATTCTCAACTCTGGAAGTGTTCAAGGCAAAGTTGATGCTGTTACAGCCCTCCATAATCTTTCCACCAGCATAGAGAATTCCACTGAACTTCTTGATGCTAGTGCTGTTTCCCCTCTTATCAATCTCCTCAAAGAGTGCAAGAAGTATTCCAAGTTTGCAGAAAAAGCTACATCACTACTCGAAATCCTTTCCAACTCTGAAGAGGGACGAATCAATATCACAGTTGCAGATGGTGGAATCTTAACCTTAGTAGAGACAGTTGAAGATGGATCACTCGTTAGCACTGAGCATGCTGTTGGAACTTTGCTATCCTTATGCCTAAGCTGCCGCGACAAATACCGGGAACTGATTCTTAAAGAAGGAGCAATCCCGGGTCTATTACGACTGACAGTGGATGGCACAGTTGAAGCTCAAAATCGAGCCCGCAGGCTTCTGGATTTGCTCAGAGATTCTCCACCACAAAAAAGAATAACCAACTCAGTTTTTGAGATAGCTAAAGACATCGCTGAACGGGTAGATGGAATAGATAATGCTGCTGAAACTGCCAAAAGGTTATTGCATGGTATGGTTCAAAGGAGTATGGAACATAGCATGAACTGCATTCAACATAGTGCTACATTGACTCCTGTGATTCCCTCCACTTGA 1176 0.4328 MGEGERAKPKEEQQQQHHHEEEEEEEGSLFVESSSRWNNQGFQILQLSEKLINANLSTKIEAAREIRKLIRKSPSSAKTRSKFGASGVIQPLVFMLSSSNLDARQSSLLALLNLAVRNERNKVKIVTAGAVPPLVELLKRQNSSIKELATAAILTLSAAELNKPIIAASGAAPLLVQILNSGSVQGKVDAVTALHNLSTSIENSTELLDASAVSPLINLLKECKKYSKFAEKATSLLEILSNSEEGRINITVADGGILTLVETVEDGSLVSTEHAVGTLLSLCLSCRDKYRELILKEGAIPGLLRLTVDGTVEAQNRARRLLDLLRDSPPQKRITNSVFEIAKDIAERVDGIDNAAETAKRLLHGMVQRSMEHSMNCIQHSATLTPVIPST* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0406 391 MobiDBLite consensus disorder prediction 1 24 - -
Lan11g0406 391 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 211 255 IPR000225 GO:0005515
Lan11g0406 391 MobiDBLite consensus disorder prediction 1 30 - -
Lan11g0406 391 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 87 129 IPR000225 GO:0005515
Lan11g0406 391 PANTHER U BOX DOMAIN-CONTAINING 39 334 - -
Lan11g0406 391 Gene3D - 35 386 IPR011989 -
Lan11g0406 391 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 129 171 IPR000225 GO:0005515
Lan11g0406 391 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 170 212 IPR000225 GO:0005515
Lan11g0406 391 SUPERFAMILY ARM repeat 46 331 IPR016024 -
Lan11g0406 391 Pfam Armadillo/beta-catenin-like repeat 118 157 IPR000225 GO:0005515
Lan11g0406 391 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 39 334 - -
Lan11g0406 391 SMART arm_5 117 158 IPR000225 GO:0005515
Lan11g0406 391 SMART arm_5 159 199 IPR000225 GO:0005515
Lan11g0406 391 SMART arm_5 200 242 IPR000225 GO:0005515
Lan11g0406 391 SMART arm_5 76 116 IPR000225 GO:0005515
Lan11g0406 391 SMART arm_5 243 284 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0406 Lan-Chr11 2960297 2963604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0406 45 327 U-box Gene Family AT3G54790 39.085 2.27e-39 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0406 K08332 - gmx:100782472 531.176