Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0397 ATGAAGTGGGAAATGGAAATACCCTCTTCTTCACCTTACACATCAAACTCAAATTGGTATGTAGAAGATAACATGAACAACACAAAATGGACAGCTTCAGAAAACAAGCTGTTTGAAAATGCTCTTGCAGTGTATGATAAGGAGACACCAGACAGGTGGCACAAATTGGCAGCAACGATACCAGGAAAGACAGTTTCTGATGTTATGAGACAATACAAGGAATTAGAAGTAGATGTTTGTAACATAGAGGCTGGTTTGGTCCCAGTTCCTGGTTATGATAGTGCTACTACTACTACTACTACAATTACTACTACTACCTCACCCTTCACCTTAAACTATATGATCAACACACATGGACATGGCTATGATGAGTTTAAAGGAGGACTCAGTGGAAAGAGATCATCAGGTAGACCTCCTGAACAGGAAAGGAAGAAAGGAGTTCCATGGACAGAAGAGGAACATAAATTGTTTCTACTGGGACTTAAGAAGTATGGCAAAGGTGATTGGAGAAACATATCTAGGAATTTTGTTATTACAAGAACTCCAACTCAAGTAGCTAGCCATGCTCAAAAGTACTTCATTAGGCAACTTTCAGGAGGCAAAGATAAGAGAAGGGCTAGCATACATGACATAACAACAGTTAATATCACAGAAACTACTTTAACTTCTTCAGATGACACCAAGAATTCCACTTCACCAGAACATTCCATGATGCTCTCACAGGTACAGCAGCAACCAAATTCTAATGCTACTTCACCAAGAGCTCATTTACAGTGGAATCTTCAGCCAAATGCAGGAGCAGCTATGTCTATGAATCATGCACATGAAAAATTGTTCATGTCTCCTTATGATGCTAGCTCCTATGGGCTTAAAATGCAAGGCCAAAATCTGCATCATGAGTCTTCATACTTACAGCCTCAGACACAAAACATGGTTTTCCAAATGCAACAGTCCTCAGAACACTTTTCCCATGCATAA 978 0.3967 MKWEMEIPSSSPYTSNSNWYVEDNMNNTKWTASENKLFENALAVYDKETPDRWHKLAATIPGKTVSDVMRQYKELEVDVCNIEAGLVPVPGYDSATTTTTTITTTTSPFTLNYMINTHGHGYDEFKGGLSGKRSSGRPPEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNITETTLTSSDDTKNSTSPEHSMMLSQVQQQPNSNATSPRAHLQWNLQPNAGAAMSMNHAHEKLFMSPYDASSYGLKMQGQNLHHESSYLQPQTQNMVFQMQQSSEHFSHA* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0397 325 Gene3D - 22 89 - -
Lan11g0397 325 CDD SANT 29 75 IPR001005 -
Lan11g0397 325 SUPERFAMILY Homeodomain-like 142 196 IPR009057 -
Lan11g0397 325 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 144 196 IPR006447 GO:0003677
Lan11g0397 325 SMART sant 26 78 IPR001005 -
Lan11g0397 325 SMART sant 145 195 IPR001005 -
Lan11g0397 325 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 11 300 IPR043363 -
Lan11g0397 325 Gene3D - 147 197 - -
Lan11g0397 325 Pfam Myb-like DNA-binding domain 148 193 IPR001005 -
Lan11g0397 325 SUPERFAMILY Homeodomain-like 19 73 IPR009057 -
Lan11g0397 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 141 197 IPR017930 -
Lan11g0397 325 ProSiteProfiles SANT domain profile. 149 197 IPR017884 -
Lan11g0397 325 ProSiteProfiles Myb-like domain profile. 22 76 IPR001005 -
Lan11g0397 325 ProSiteProfiles Myb-like domain profile. 141 193 IPR001005 -
Lan11g0397 325 MobiDBLite consensus disorder prediction 125 148 - -
Lan11g0397 325 PANTHER MYB TRANSCRIPTION FACTOR MYB51 11 300 - -
Lan11g0397 325 MobiDBLite consensus disorder prediction 222 254 - -
Lan11g0397 325 CDD SANT 148 193 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0397 Lan-Chr11 2897628 2900469 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan11g0397 Myb_DNA-binding 1.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0397 - - gmx:778181 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0397 11 2897628 2900469 Lan9g1181 9 19192391 19194979 LSH