Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0392 ATGGGAAGTAGAACTCAGAAAGAGTCTAATTCTGTGTCCTTGATCAAAGGACAGTGGTCTGATGAAGAAAACAGGAAACTGATAAAGTTTGTGAAGAAATATGGTGAAAGCAAATGGGCTCAAATAGCTGAGAATTTGGATGGAAGAGTTGGTAAGCAGTGTAGAGAGAGATGGAATAATCATCTGCGTCCAGATATTAAGAAAGATAGTTGGAGTGAAGAAGAGGAGAGAACATTAGTAGAAACCCACGCCAAGGTTGGAAATCGTTGGAGTGAGATTGCAAAGTACATTCCAGGAAGAACAGAAAATGCAATAAAGAACCATTGGAATGCCACAATAAGGAGACAGAGAAGAAAACCAATGTCTTTTATACTTGAAGACTATATCAAAACCAAGACTCTAATTAACACTCCCACAGCAACACCATTCTCAAAGAAATCTGAAGCAAATAATTTAAACCTTGTTTCTAAACCCTTTGATCTATCAGTTTCTAATGAGTTACTCTTCATGCAACAAGTTTTCGCTGAGAATCAGAATCAACAATCACTTTTATCAGCAATGAAAACTTTATTAATTAAGAGATAA 585 0.3607 MGSRTQKESNSVSLIKGQWSDEENRKLIKFVKKYGESKWAQIAENLDGRVGKQCRERWNNHLRPDIKKDSWSEEEERTLVETHAKVGNRWSEIAKYIPGRTENAIKNHWNATIRRQRRKPMSFILEDYIKTKTLINTPTATPFSKKSEANNLNLVSKPFDLSVSNELLFMQQVFAENQNQQSLLSAMKTLLIKR* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0392 194 Pfam Myb-like DNA-binding domain 19 79 - -
Lan11g0392 194 PANTHER TRANSCRIPTION FACTOR MYB119-RELATED 7 157 - -
Lan11g0392 194 PANTHER MYB PROTEIN-RELATED 7 157 - -
Lan11g0392 194 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lan11g0392 194 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lan11g0392 194 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 62 IPR017930 -
Lan11g0392 194 ProSiteProfiles Myb-like domain profile. 11 62 IPR001005 -
Lan11g0392 194 Gene3D - 15 67 - -
Lan11g0392 194 CDD SANT 70 110 IPR001005 -
Lan11g0392 194 CDD SANT 19 62 IPR001005 -
Lan11g0392 194 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
Lan11g0392 194 Gene3D - 70 134 - -
Lan11g0392 194 SMART sant 67 115 IPR001005 -
Lan11g0392 194 SMART sant 15 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0392 Lan-Chr11 2863714 2867276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0392 5 175 MYB Transcription Factor Family AT5G58850 46.890 4.09e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan11g0392 Myb_DNA-bind_6 1.2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0392 K09422 - lang:109359637 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0715 16 10461878 10464881 Lan11g0392 11 2863714 2867276 PCT