Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0374 ATGGCAACAGACGCAACAACCAAGTTCAAAAACCTCGATTTCCTTCCCGATTCCCACGCCGAAGAACTAACGCCTTCAACTCACGACGGCCTCCACTTCTGGCAGTTCATGGTTTCGGGATCAATCGCTGGATGCATTGAACACATGGCAATGTTTCCCGTTGACACCGTCAAAACTCACATGCAAGCCATTGGTTCTTGCCCTATCAAATCCGTTACCGTCCGTCAAGCCCTAAATTCTATCCTCAAATCGGAGGGTCCCTCCGCCCTTTACCGCGGCATCGGCGCCATGGGCCTCGGTGCTGGACCCGCACACGCCGTTTATTTCTCCGTTTATGAAACGTGTAAGAAACGTTTCTCTAATGGGGACCCTAATAACTCGTTGGCGCACGCTGGTTCCGGCGTTTGTGCCACCGTGGCCAGCGACGCGGTGTTTACGCCGATGGATATGGTGAAGCAGAGGCTGCAGCTGAGTAATAGCGGGTATAAGGGGGTTTGGGATTGTGTGAAGAGGGTGATGAATGAGGAAGGGTTTGGGGCGTTTTATGCATCGTATAGGACTACAGTGTTGATGAATGCTCCGTTTACTGCGGTGCATTTTGCCACGTATGAGGCTGCGAAAAAGGGACTCGTGGAGGTTTCGCCGGAGAGTGCTGATGATGAGCGGTGGGTTGTTCATGCCACGGCTGGTGCTGCTGCTGGTGCTTTGGCTGCTGTAGTTACAACTCCACTTGATGTGGTTAAAACTCAATTGCAGTGTCAGGGTGTTTGTGGCTGTGATAGATTCAAAAGTGGTTCAATCGGAGATGTTATTAAAACAATTTTGAAAAAGGATGGATACAAAGGGCTCATGAGAGGATGGGTTCCAAGGATGCTATTTCATGCTCCTGCAGCTGCAATCTGTTGGTCTACATATGAAGCTGGAAAGTCCTTTTTTCATGATTTTAATCAACAGAAAGACACTGGAACTGTTACTTAA 978 0.4928 MATDATTKFKNLDFLPDSHAEELTPSTHDGLHFWQFMVSGSIAGCIEHMAMFPVDTVKTHMQAIGSCPIKSVTVRQALNSILKSEGPSALYRGIGAMGLGAGPAHAVYFSVYETCKKRFSNGDPNNSLAHAGSGVCATVASDAVFTPMDMVKQRLQLSNSGYKGVWDCVKRVMNEEGFGAFYASYRTTVLMNAPFTAVHFATYEAAKKGLVEVSPESADDERWVVHATAGAAAGALAAVVTTPLDVVKTQLQCQGVCGCDRFKSGSIGDVIKTILKKDGYKGLMRGWVPRMLFHAPAAAICWSTYEAGKSFFHDFNQQKDTGTVT* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0374 325 PRINTS Mitochondrial carrier protein signature 49 63 IPR002067 GO:0055085
Lan11g0374 325 PRINTS Mitochondrial carrier protein signature 140 158 IPR002067 GO:0055085
Lan11g0374 325 PRINTS Mitochondrial carrier protein signature 182 200 IPR002067 GO:0055085
Lan11g0374 325 PRINTS Mitochondrial carrier protein signature 230 252 IPR002067 GO:0055085
Lan11g0374 325 Pfam Mitochondrial carrier protein 127 211 IPR018108 -
Lan11g0374 325 Pfam Mitochondrial carrier protein 221 314 IPR018108 -
Lan11g0374 325 Pfam Mitochondrial carrier protein 31 121 IPR018108 -
Lan11g0374 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 221 311 IPR018108 -
Lan11g0374 325 Gene3D Mitochondrial carrier domain 133 325 IPR023395 -
Lan11g0374 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 209 IPR018108 -
Lan11g0374 325 PANTHER MITOFERRIN-1-RELATED 1 320 - -
Lan11g0374 325 SUPERFAMILY Mitochondrial carrier 29 306 IPR023395 -
Lan11g0374 325 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 1 320 - -
Lan11g0374 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 31 118 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0374 Lan-Chr11 2711685 2714201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0374 1 321 Chloroplast and Mitochondria Gene Families AT1G07030 73.231 1.84e-170 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0374 K15113 - gmx:100802640 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1026 2 21297247 21299995 Lan11g0374 11 2711685 2714201 LSH