Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0364 ATGGCTTCTTATTTTCAAACATTGCTTGTGCTTGTTATGGTAACTTTGGTCACATTATTAGTGATCCCTGTTAATGCAGAACTCTCTCCTCATTTCTATGACAAAATTTGCCCTCAAGCATTGCCAGCAATAAAATCAGCAGTGTTTCAAGCAATTAAAAAAGAGCAACGCATTGGAGCATCTCTACTTCGCTTGCATTTCCATGACTGCTTTGTTAATGGTTGTGATGGATCAGTTCTGCTTGATGACACAGCTAGCTTCACCGGTGAAAAGACTGCACAACCAAATAATAATTCAATCAGAGGATTTTCAGTGGTTGATGAAATCAAAGCTGTAGTTGACAAAGCTTGCAAACGCCCTGTGGTTTCATGTGCTGATATTTTGGCCATAGCAGCTCGTGATTCTGTTGCCATACTTGGAGGTTCACAATTTTGGTACCAAGTGTTACTAGGCAGAAGAGATGCAAGAACTGCAAGCAAAGCTGCAGCAAATTCCAATCTTCCTCCTCCAACATTCAACTTCTCACAACTTATTTCTAATTTCAACACTCATGGATTGAATGTTAGAGACCTTGTAGCACTCTCTGGTGGCCACACCATTGGATTTGCAAGGTGCACTACTTTCAGGACCAGGATTTACAATGAAACAAGACTCATAGACCCAAAGTTTGCAGCATCTTTGAGGAACAAATGTCCTAAAAAGGGTAATGACAATGTTTTAGAACAATTGGATGCAACTGTTGCAAGAGTTGACACCACATACTTTAAGGATTTGCTTCATAAAAAGGGTCTACTCCATTCTGATCAAGAACTGTTCAAGGGAAAAGGAAGTGCAAGTGATAACTTGGTTAAACTATATAGCAGAAGCACTTCAGCTTTTGCTAGAGACTTTAAAGCTTCTATGATCAAGATGGGTAATTTGAAGCCTCTTACTGGTAGAAAAGGTGAGATTAGATGCAATTGCCGAAGGATCAATTAG 978 0.3957 MASYFQTLLVLVMVTLVTLLVIPVNAELSPHFYDKICPQALPAIKSAVFQAIKKEQRIGASLLRLHFHDCFVNGCDGSVLLDDTASFTGEKTAQPNNNSIRGFSVVDEIKAVVDKACKRPVVSCADILAIAARDSVAILGGSQFWYQVLLGRRDARTASKAAANSNLPPPTFNFSQLISNFNTHGLNVRDLVALSGGHTIGFARCTTFRTRIYNETRLIDPKFAASLRNKCPKKGNDNVLEQLDATVARVDTTYFKDLLHKKGLLHSDQELFKGKGSASDNLVKLYSRSTSAFARDFKASMIKMGNLKPLTGRKGEIRCNCRRIN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0364 325 PANTHER PEROXIDASE 72-RELATED 9 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan11g0364 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Lan11g0364 325 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan11g0364 325 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan11g0364 325 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan11g0364 325 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan11g0364 325 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan11g0364 325 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan11g0364 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan11g0364 325 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan11g0364 325 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan11g0364 325 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan11g0364 325 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan11g0364 325 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan11g0364 325 SUPERFAMILY Heme-dependent peroxidases 27 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan11g0364 325 CDD secretory_peroxidase 27 324 IPR033905 GO:0004601|GO:0042744
Lan11g0364 325 Gene3D - 32 325 - -
Lan11g0364 325 PANTHER CATIONIC PEROXIDASE 9 324 - -
Lan11g0364 325 Pfam Peroxidase 45 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan11g0364 325 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Lan11g0364 325 ProSiteProfiles Plant heme peroxidase family profile. 27 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan11g0364 325 Gene3D Peroxidase, domain 2 168 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0364 Lan-Chr11 2638437 2641479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0364 24 325 Peroxidase AT5G05340 57.705 1.77e-118 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0364 K00430 - gmx:100811170 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1041 2 21562733 21564435 Lan11g0364 11 2638437 2641479 LSH
Lan2g1040 2 21548770 21550686 Lan11g0364 11 2638437 2641479 PCT
Lan11g0364 11 2638437 2641479 Lan2g1040 2 21548770 21550686 PCT