Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0361 ATGTTTGGATGTCCAGAGACAGAAAGATTAGATGAGATAGCAAAGAAGGTGATAGCAGAGGCTGAAGCATCTTGTCCAATGGGAAGGAAGCATTTTTATGGTCCAGCTTCTGGAACAACCTTAAATACTGTAACACCTTGTGCTGCATGTAAGCTTCTGAGAAGGAGGTGTGCTGAAGAATGCCCTTTCTCTCCTTATTTCTCACCACATGAGCCTCAAAAGTTTGCATCTGTTCATAAAGTGTTTGGTGCAAGCAATGTCTCTAAGATGCTAATGGAGGTACCTGTGGGGCAAAGAGCTGATGCTGCAAATAGCTTGGTTTATGAAGCAAACTTGAGGTTGAGAGATCCAGTATATGGATGCACGGGTGCAATTTCAGCTTTGCAGCAACAAGTTCAATCTTTACAAGCTGAACTAAATGCCGTAAGAGATGAGATACTAAAATATAAATATAGAGAAGCTGCAAGTCTTATTTCTTCTCATGCTGTTTTAGTTTCTTCTGGTGAAGCACCAATTCCTGTGGATTCATCATCACAAGGTTTTTCTCAACCTCTTCCTCAGTCAACAGCTCCTCCTACTCCACTAAAACCATTACCTTCACCCTCTGTTGTCCTTTCATCCTTGTCTTCAACTTCAACTTCTGTGTACATTTCACCTAAAAGCACAATGAGCCATGGATCCGTTTCTAGTGAAAATATTGTTTCATACTTTGTTTAG 717 0.4073 MFGCPETERLDEIAKKVIAEAEASCPMGRKHFYGPASGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPVGQRADAANSLVYEANLRLRDPVYGCTGAISALQQQVQSLQAELNAVRDEILKYKYREAASLISSHAVLVSSGEAPIPVDSSSQGFSQPLPQSTAPPTPLKPLPSPSVVLSSLSSTSTSVYISPKSTMSHGSVSSENIVSYFV* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0361 238 Pfam Lateral organ boundaries (LOB) domain 46 142 IPR004883 -
Lan11g0361 238 Coils Coil 125 152 - -
Lan11g0361 238 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 31 237 - -
Lan11g0361 238 ProSiteProfiles LOB domain profile. 45 146 IPR004883 -
Lan11g0361 238 MobiDBLite consensus disorder prediction 175 201 - -
Lan11g0361 238 PANTHER LOB DOMAIN PROTEIN 31 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0361 Lan-Chr11 2620140 2621582 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0361 27 159 AS2 family AT2G30340 77.612 1.26e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan11g0361 LOB 2.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0361 - - ccaj:109795340 303.908