Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0359 ATGTCAGAGATTGAAGAAGTAGTGGTGGAAAATTCTGCTTCCACCACCACTCTCTTCGATAAGTATGAGCTTGGTAGGCTCTTAGGTTGCGGCGCATTTGCCAAGGTCTATCATGCTCGAAACATGGAGACCGGCGAAAGCGTCGCAATCAAGATAATAAGCAAAAAGAAGATTGCTGGAACTGACCTCGCAACCAGCGTGAAGCGCGAGGTTTCAATCATGAGCCAACTCCACCATCCCAACATTGTGAAACTCCATGAAGTCCTCGCAACCAAAAGCAAAATCTACTTCGTTATGGAATTCATCAAAGGTGGCGAACTATTCACAAAAATCGCCAAAGGAAGGTTCAGCGAAGATCTCGGTCGTCGCATTTTTCAGCAGTTAATCTCCGCCGTCGGTTACTGTCACTCCCGCGGTGTATTCCACCGTGATCTTAAGCCAGAAAATCTCCTTCTCGACGAGAACGGTAACTTAAAAATAACAGATTTCGGTCTCAGTGCGGTGAAGGATCAGATTCGAACAGATGGGTTGTTACACACACTTTGCGGCACTCCCGCTTACGTAGCACCAGAGATTTTGGTGAAGAGAGGTTATAATGGATCCAAAGTTGACGTGTGGTCTTGTGGTATTATTCTCTTTGTTCTTGTTGCTGGTTATCTTCCATTCAATGATACAAACCTTATGGTGATGTATAAGAAGATTTATAAAGGAGAATTTCGGTGTCCAAGGTGGTTCTCACCAGAGCTACGACGGTTTTTGTCGCGGTTGCTTGAAACGAACCCGGTGACAAGGATCACGGTTGATGAGATTCTCAAGGATCCGTGGTTTAAGAAAGGGTATAAGGAAATCAAGTTTCATGAAGAGTGGAAGGAGAATAATGAGGGTATGGAGAATGTTAAAGAGTTGAACGCTTTTGATATAATCTCATTTTCTTCAGGTTTGAATTTGTCTGGTTTGTTTAGCGTGGTGGAGGATTCTGAGAGGTTCGTGTTGCGGGGTTCGCCGGAGAAGGTTTTGGAGACGGTGGAGGAAGTGGGGAAGGTGGAAAAGTTTGTAGTGAAGAGAAGGAAAGAGTATGGGGTGGAATTGGAAGGGGTGAATGGTAATTTTGGAATATTGGTTGTGGTTTACCGGTTAACGGAGGAGGTGGTGGTGGTGGAGGTGAAGAGGAGAGGTTGTGACATTGTTGCTTTTAAGGATGTTTGGATGAACAAGTTGAGGCCTTGTCTCTTTGATGCCGGAAGTAGTAGCAATCAGCAGGTTGCCGGTGACTGTTGA 1278 0.4515 MSEIEEVVVENSASTTTLFDKYELGRLLGCGAFAKVYHARNMETGESVAIKIISKKKIAGTDLATSVKREVSIMSQLHHPNIVKLHEVLATKSKIYFVMEFIKGGELFTKIAKGRFSEDLGRRIFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKITDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILVKRGYNGSKVDVWSCGIILFVLVAGYLPFNDTNLMVMYKKIYKGEFRCPRWFSPELRRFLSRLLETNPVTRITVDEILKDPWFKKGYKEIKFHEEWKENNEGMENVKELNAFDIISFSSGLNLSGLFSVVEDSERFVLRGSPEKVLETVEEVGKVEKFVVKRRKEYGVELEGVNGNFGILVVVYRLTEEVVVVEVKRRGCDIVAFKDVWMNKLRPCLFDAGSSSNQQVAGDC* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0359 425 Gene3D Kinase associated domain 1, KA1 298 413 - -
Lan11g0359 425 SUPERFAMILY Protein kinase-like (PK-like) 18 287 IPR011009 -
Lan11g0359 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Lan11g0359 425 CDD CIPK_C 303 410 - -
Lan11g0359 425 Pfam Protein kinase domain 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0359 425 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 420 - -
Lan11g0359 425 PANTHER - 1 420 - -
Lan11g0359 425 Gene3D Phosphorylase Kinase; domain 1 11 101 - -
Lan11g0359 425 ProSiteProfiles Protein kinase domain profile. 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0359 425 SMART serkin_6 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0359 425 Pfam NAF domain 300 354 IPR004041 GO:0007165
Lan11g0359 425 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Lan11g0359 425 ProSiteProfiles NAF domain profile. 297 321 IPR018451 GO:0007165
Lan11g0359 425 Gene3D Transferase(Phosphotransferase) domain 1 102 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0359 Lan-Chr11 2599873 2601440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0359 1 421 CBL-interacting serine-threonine protein kinases AT2G30360 63.303 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan11g0359 Pkinase 6.3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0359 - K12761 gmx:100813555 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0294 4 4961190 4963038 Lan11g0359 11 2599873 2601440 PCT
Lan16g0536 16 6242135 6243950 Lan11g0359 11 2599873 2601440 PCT
Lan11g0359 11 2599873 2601440 Lan4g0294 4 4961190 4963038 PCT
Lan11g0359 11 2599873 2601440 Lan16g0536 16 6242135 6243950 PCT