Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0357 ATGTATTCCATGAAGGAGAATAAAGAAGATTTCAAGTTAGAACATGGTTATGTGGAAACTGATCCATCTGGTCGTTATGGCCGGTTTGAAGATGTTCTTGGAAAAGGGGCAATGAAGACAGTGTACAAAGCAATTGATGAGGTCCTTGGAATAGAGGTAGCATGGAATCAGGTTAAACTCAATGAGGCACTTCGTACACCGGACGATTTGAATCGGCTTTACTCAGAGGTTCATCTCCTCAGCACCCTCAAACACCGGTCAATCATAGAATTCTATACCTCTTGGATTGATGTTGATAACAAGGCCTTCAACTTTGTTACAGAAATGTTCACATCAGGATCCCTCAGAGTATACCGGAAGAAATATACGGGAGTTAGCATAAAAGCAATAAAAAGTTGGGCACGCCAAATCTTACAAGGTCTTGTTTATCTTCATGGACATGATCCACCAGTAATCCATAGGGACCTCAAATGTGATAATATATTTGTCAATGGCCATCTTGGACAAGTGAAAATTGGTGACCTAGGACTAGCTGCAATTCTCCACGGTTCTCAGCCAGCCCACAGTGTTATAGGTACCCCAGAGTTCATGGCACCAGAATTGTATGAGGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTATTGGAATTGTTTACATCTGATTATCCATATAGTGAATGTTCTAACCCGGCACAGATTTACAAGAAAGTGATATCGGGTAAGCTACCAATAGCTTTTTATCGGATTGAAGATATGGAAGCTCAGAAGTTTATTGGAAAATGCCTAGGACCTGCATCAAAAAGACCATCCGCAAAAGATTTGTTAATTGACCCTTTTCTTATGTCTGATGAATCATCATCACCAGCTAAGTTTGGAATTCAAAAGCCTCTTTTGAATAATATTGAGATGGCAAAACTTCACTTGAGTGATAACTTAACTAGGACTGAAATGAAGATAATAGGGAAGCTGAATCCCGGAGATGATACAATCTTTCTCAAAGTGCAGATTCCTGATAAGGATGGTTCTGTTAGGAATGTATTTTTCCCCTTTGAAATTTCCACTGACACCCCCATTGATGTTGCAACTGAAATGGTAAAAGAGTTAGAGATTGCTGATAGGGAGCCTTTTGAAATAGCAAATATGATTGAAGGAGAGATATCTACTCTGCTACCACATAACAGGGAAATTAACCGTTCCGATGCCTGCAATACATTCAGTTATGAAGATGATGATTATGACAATGGACCTCATCATCATTACCGCACATTCTCTTCTTGTTCATCATCCCAAGAATCAATATCAGGTTTAGACAGTGGAAATTATTGGCCCCATGACGATTTGCTTGATGATACCAGTTCCAGATGTTGGTCGCAAGCGACATATTCCGACTTGAATTATTATTCTATGGATGATCAGGAGTACAATGTGTCTTCTATCAGAAAAGATAAACTACCTATCATTAAAAGTCACAAGTGTACAAGGTTTTCTCCTAATGAAGAGTTCAGCAATTGCAACCAATGTAAAGTTGTAATAGGATCATTGACACCTTCTACTAGTAAAAGTAAGAATGTGATCGACAATCGCAGACTGACACGGAACAAGTCATTGATTGATCTAAGGAGCCAACTATTACACAAATCGCTGGTCGAGGAGGTTCACAGAAGACGGTTATTTCAGACAGTTGGTTCTGTGGAAAATATTGGATATCAGGCACCTTGTGATGTTTCTACACAAAATGTCTCTTCAAGGAGTGGCAAGCAAGAAAAACTTAAGAGATGA 1794 0.3919 MYSMKENKEDFKLEHGYVETDPSGRYGRFEDVLGKGAMKTVYKAIDEVLGIEVAWNQVKLNEALRTPDDLNRLYSEVHLLSTLKHRSIIEFYTSWIDVDNKAFNFVTEMFTSGSLRVYRKKYTGVSIKAIKSWARQILQGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLELFTSDYPYSECSNPAQIYKKVISGKLPIAFYRIEDMEAQKFIGKCLGPASKRPSAKDLLIDPFLMSDESSSPAKFGIQKPLLNNIEMAKLHLSDNLTRTEMKIIGKLNPGDDTIFLKVQIPDKDGSVRNVFFPFEISTDTPIDVATEMVKELEIADREPFEIANMIEGEISTLLPHNREINRSDACNTFSYEDDDYDNGPHHHYRTFSSCSSSQESISGLDSGNYWPHDDLLDDTSSRCWSQATYSDLNYYSMDDQEYNVSSIRKDKLPIIKSHKCTRFSPNEEFSNCNQCKVVIGSLTPSTSKSKNVIDNRRLTRNKSLIDLRSQLLHKSLVEEVHRRRLFQTVGSVENIGYQAPCDVSTQNVSSRSGKQEKLKR* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0357 597 Gene3D Transferase(Phosphotransferase) domain 1 110 292 - -
Lan11g0357 597 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 591 - -
Lan11g0357 597 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0357 597 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 6 591 - -
Lan11g0357 597 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0357 597 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Lan11g0357 597 CDD STKc_WNK 25 285 - -
Lan11g0357 597 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0357 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Lan11g0357 597 SUPERFAMILY Protein kinase-like (PK-like) 29 286 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0357 Lan-Chr11 2582043 2586270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0357 17 588 MAP Kinase Kinase Kinase AT5G58350 59.247 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lan11g0357 Pkinase 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0357 K08867 - gmx:100272203 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1047 2 21715928 21720487 Lan11g0357 11 2582043 2586270 LSH
Lan2g1047 2 21715928 21720487 Lan11g0357 11 2582043 2586270 PCT
Lan16g0541 16 6292048 6296853 Lan11g0357 11 2582043 2586270 PCT
Lan11g0357 11 2582043 2586270 Lan2g1047 2 21715928 21720487 PCT
Lan11g0357 11 2582043 2586270 Lan16g0541 16 6292048 6296853 PCT