Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0338 ATGGCACCAGTTTCATTACCTCCAGGTTTTAGGTTTCACCCTACTGATGAAGAACTTGTTGCTTATTACCTCAAAAGAAAGATCAATGGTCGTAAAATCGAGTTGGAGATCATCCCAGAAGTTGATCTATATAAGTGTGAACCATGGGACTTGCCAGGGAAATCATTGTTACCGGGAACAGATTTAGAATGGTATTTCTTCAGCCCACGTGATAGGAAGTACCCAAATGGATCGAGAACAAATCGTGCTACAAAATCTGGATATTGGAAGGCTACAGGAAAAGATAGGAAAGTGAACTCATTGAATCGTGATGTTGGAATGAAGAAAACCCTAGTTTACTATCGAGGGAGAGCACCACATGGTTTTCGCACAGGTTGGGTTATGCATGAATATCGTCTTGATGAAAGAGAATGTGAAACTAATTCAGGATTGCAGGAAGCATATGCTCTTTGCCGTATTTTCAAGAAGAGTACAGCAGTTACCCCAAATGTTGGGGATCACTATGTTAATGTTACAAGCCATGCAAACCAAATTACAAGCGATCAATCATCAAGCATTGAACTATACTCTGAAGGACAAGGTGAAGATTTGGATAGTTCAAATTATTTAATGCCGATGGATACATGTTCACCCCACAACATGGGAAATGAGGATCCTCTTAATGTCAATGAAGATCATGGGACATGGTCACAGTACTTATCAGATGACCCATTATTCACTCTTCCCACTTCTTCATTTCCTAATTATGGTGCCATATCATACCCTCCATCAAAGGTGGATGTAGCGCTAGAGTGTGCAAGGATGCAGCATAGGTTTGTCATGCCTCCATTGGAGGTGATGAATGAATTCCCTCAAGTTGGAACCTCTGAGCAGAAGAATATGACACAAGCCATGTATGGAAGCAGAAATGAAACAGATATAGTGCAAGAAATTCTTTCAGTTGCTCATGCTTCTCAGGAACTGATAAATAACCAGTCCATCTACTCACAGGGATGGAGCAGTGGGAATGAAACTTATGCTCCTCGTGAAGATGATTTCACTTTCATGGTTGGCACTAATTGCGATCATTTAAATGATTTGAACTCTATGAATACATTTGTTGGAGATCCAAACAAAAGATCCATAGAGATTGGAGATCTGGATGAGGAATTTAAGGCTGAGAGGATGGTTGAGAACTTAAGATGGGTTGGAATGTCAAAAGAAGATTTGGAAAAGAGCTTTATGGAAGACCAAAAGATTGTTTCCATTGAGGATATTTCAAGCTTCCAATCAAACAGGAAAGAGAATGAGGTGCAAGAATCTGGTCAACACAATAGCAACAAGGAACTCAATGACCCTTATATCAATGATTACTCGTTTGGCTTCAACAATGAAGATGACCCTAACGAGAACCATATAGAAGATGGTAACATGGAAGATTACACAAGTTCACCAAGCTTTGAGGTAGTTGAAGAAATAAAAGTCAGTCATGGAATGTTTATTTCCACAGGTCAAGTAGCTGAGACATTCTTTCACCAACTAGTTCCTTCAGAAACCCTCCAAGTTCACCTCAATCCAGTGATGGCAAATAATCAGTACTCAATAGAGAATAATGCAGAGACACTAATGGTGACAATGGAGAACCATGGGTCTTTCTTTAAGGAATTTAAGGCCTATGTGGCAGGGAAGCTAATAAAGCCATCAAAGACAATAGCAAGTGCCATTGTATTCATCTTTGCACTTCTTTTGATGCATTATGTTTATTTGAAGGAAGAATTGAAAGCAAAATGCTACTATAGTGGTACCAGCATGAAGAGAAGAAAGCAATCATCTGAGATAATCAAATGGAATGAATCAGAAAAGGTTTGGTTTATTGGTATAAAAAGTAAGAAAGTATTTAGTGCAGTCTTGAAGAAAATAAGCATTTTCCTTACCATATCTTTTGCTCTTTGTGCCATGTGGGCTAACCTAGTTAACCCTTGA 1962 0.3899 MAPVSLPPGFRFHPTDEELVAYYLKRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGTDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSLNRDVGMKKTLVYYRGRAPHGFRTGWVMHEYRLDERECETNSGLQEAYALCRIFKKSTAVTPNVGDHYVNVTSHANQITSDQSSSIELYSEGQGEDLDSSNYLMPMDTCSPHNMGNEDPLNVNEDHGTWSQYLSDDPLFTLPTSSFPNYGAISYPPSKVDVALECARMQHRFVMPPLEVMNEFPQVGTSEQKNMTQAMYGSRNETDIVQEILSVAHASQELINNQSIYSQGWSSGNETYAPREDDFTFMVGTNCDHLNDLNSMNTFVGDPNKRSIEIGDLDEEFKAERMVENLRWVGMSKEDLEKSFMEDQKIVSIEDISSFQSNRKENEVQESGQHNSNKELNDPYINDYSFGFNNEDDPNENHIEDGNMEDYTSSPSFEVVEEIKVSHGMFISTGQVAETFFHQLVPSETLQVHLNPVMANNQYSIENNAETLMVTMENHGSFFKEFKAYVAGKLIKPSKTIASAIVFIFALLLMHYVYLKEELKAKCYYSGTSMKRRKQSSEIIKWNESEKVWFIGIKSKKVFSAVLKKISIFLTISFALCAMWANLVNP* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0338 653 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Lan11g0338 653 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 376 - -
Lan11g0338 653 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 376 - -
Lan11g0338 653 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Lan11g0338 653 MobiDBLite consensus disorder prediction 424 470 - -
Lan11g0338 653 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Lan11g0338 653 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0338 Lan-Chr11 2440417 2445670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0338 1 646 NAC Transcription Factor Family AT1G65910 43.299 8.42e-165 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan11g0338 NAM 7.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0338 - - gmx:100809019 900.582