Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0334 ATGAATCACTCCATCATCACTTTCCTTATTATATTCTGTTTCCTTCTCCAAAACCTTACACACTCTAACTCTACTACAGAAATGTCACACTCACTCTTCACACTTACCATTCTCTTCTTCACACTCTCTTCATTCGTAACCTCTCACTCCCCTTCTTCTTCTTCCTCTTCTCCTTTGATCTCCGAATGGCAATCCGCACACGCCACCTACTACGCCGCCTCCGATCCACGTGACGCCGTCGGCGGCGCGTGCGGATACGGCGATTTAATCAAAGTCGGTTACGGTCAGGCCACGGTAGGGTTGAGCGAGGTGCTGTACGAGCGTGGCCAGATCTGTGGCGCGTGCTTCGAGGTGCGTTGTGTTGATGACCTAAAGTGGTGTATACCTGGAACCTCTATCATTGTTACCGCTACTAATTTCTGTGCTCCGAACTATGGCTTCACATCTGAGGGTGGTGGACACTGTAATCCTCCAAATAAGCACTTTGTTCTACCGATTGAGGTTTTTGAGAAGATCGCTATCTGGAAAGCAGGGAACATGCCGGTGCAGTATCGCAGGTACTCTTATCATTTTTTTTCTATCTTGCATGTTGCTATGTTAAATAATTTAAGAAACTGA 618 0.4676 MNHSIITFLIIFCFLLQNLTHSNSTTEMSHSLFTLTILFFTLSSFVTSHSPSSSSSSPLISEWQSAHATYYAASDPRDAVGGACGYGDLIKVGYGQATVGLSEVLYERGQICGACFEVRCVDDLKWCIPGTSIIVTATNFCAPNYGFTSEGGGHCNPPNKHFVLPIEVFEKIAIWKAGNMPVQYRRYSYHFFSILHVAMLNNLRN* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0334 205 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 81 186 IPR007112 -
Lan11g0334 205 PANTHER EXPANSIN-A15 46 187 IPR002963 GO:0009664
Lan11g0334 205 PRINTS Expansin signature 93 107 IPR002963 GO:0009664
Lan11g0334 205 PRINTS Expansin signature 120 131 IPR002963 GO:0009664
Lan11g0334 205 PRINTS Expansin signature 133 143 IPR002963 GO:0009664
Lan11g0334 205 PRINTS Expansin signature 152 169 IPR002963 GO:0009664
Lan11g0334 205 PRINTS Expansin signature 169 182 IPR002963 GO:0009664
Lan11g0334 205 SUPERFAMILY Barwin-like endoglucanases 62 187 IPR036908 -
Lan11g0334 205 Gene3D - 46 188 IPR036908 -
Lan11g0334 205 SMART dpbb_1 98 184 IPR007112 -
Lan11g0334 205 Pfam Lytic transglycolase 99 184 IPR009009 -
Lan11g0334 205 PRINTS Expansin/Lol pI family signature 62 77 IPR007118 GO:0005576
Lan11g0334 205 PRINTS Expansin/Lol pI family signature 80 98 IPR007118 GO:0005576
Lan11g0334 205 PRINTS Expansin/Lol pI family signature 102 120 IPR007118 GO:0005576
Lan11g0334 205 PRINTS Expansin/Lol pI family signature 177 193 IPR007118 GO:0005576
Lan11g0334 205 PANTHER EXPANSIN-A13 46 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0334 Lan-Chr11 2422301 2423031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0334 62 186 Expansin Gene Family AT3G03220 86.400 3.55e-83 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0334 - - lang:109359633 384.415