Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0322 ATGAACAAGTTCAAGTTCGAATCTTTTTTCATTTTCCTATCTGGGTTTCTCTCCATAACCGCTTTCTTAGTTAACTCCCAAAACGACGACGCTTCTGTAATGCTATCTCTCAAAAAGGCTCTGAACCCACCCGAATCTCTCGGTTGGTCCGACCCGAACCCATGCAACTGGGTCCATGTCACTTGCTCCGATGAGAAACGTGTAACTCGGATCCAAATCGGGCACATGAACCTCCAAGGCACTCTCCCCTTCACCCTTCAGAATCTGACCCAGTTGCAGCACTTGGAGCTCCAATACAATAACTTTTCGGGTCCCATACCCGACTTAAATGGGTTAACTTCGCTCCAAGTTTTCATGGGTAGTAACAACCGCTTCACTTCAATCCCAACCTCTTTCTTCAACGGCTTGTCTCAGCTTCAAGCTGTGGAAATTGATAACAACCCTTTTGAAGAATGGGAGATACCTCTGAGTCTTCAGAACGCTTCTTCACTTCAGAACTTTTCAGCTAACTCTGCTAATGTTAGAGGCAAGTTACCTGATTTCTTTGGCTCTGATGTTTTTCCAGGTTTGACCCATTTGCATTTAGCATTTAACAAAATTGAAGGAACTCTTCCTTTAAGCTTTTCTGGGTCACAGATTGAGACCCTTTGGTTGAATGGCCAAAAGGGTGTTGGTGATGCTAAACTTGGTGGCACTGTTGAGGTTTTGAAGAACATGACCTTTTTGAGTGAGGTTTGGTTGCAATCAAATGGTTTCACTGGTCCTTTACCAGATTTTTCAGGGTTGAAAAGCTTGCAAGTTTTGAGCTTGAGGGATAATAGTTTCACTGGTCCGGTTCCGAGTTCACTGTTGAGTCTTAAGTCTTTGAAAGTTGTTAACTTGACTAATAACTTTCTCCAGGGTCCAATGCCAGTGTTTGGTCCTGATGTAGAGGTTGATATGAGAAAGGATTCAAATAGCTTTTGCCTGCCTGGTCCTGGTGAATGTGATCCCAGGGTTCAAGTTTTGCTTTCTGTTGTTGGACTTTTTGGTTATCCTCAAAGATTTGCTGAGAATTGGAAGGGGAATGATCCTTGTAATGATTGGATTGGGATTACTTGCAGTGATGGGAATGTTACTGTTGTTAATTTTGAGAAGATGGGGCTTACTGGTATGATATCGCCGGAGTTTGCCAAGCTCAAATCATTGCAAAGACTTGTACTTGCTGATAACAATATCACTGGTTCAATTCCGGAGGAACTTACTACTTTGCCCGTGCTTACTCAATTGAATGTCGCAAACAATCAGCTTTTCGGGAAAAAGCCAAGTTTTAGGAGTAATGTGATTGTTGACACTAATGGTAACAAGGATATAGGGAAGGATAAAAGCAGTTTGACCCCTCAAGGTCCCATGTCTTCAGAAGTTCCTAGTGCGAGGGGAGAAAATGGCACGAGTTCTGAAAATGGTGGCAAAAAGTCTTCTTCACATGTTGGAGTGATTGTGTTTGCTGTGGTCGGGGCTGTATTTGTGGTTGCCTTGATTGGTTTGTTAGTTTTCTGCTTGCTTAGGGTGAAGCAGAAGCGGTTACGCAGGGTCCAAAGCCCAAATACACTAGTCATTCACCCTCTTCATTCTGGTTCAGATAATGAAAGTGTGAAGATTACGGTTGCAGGTTCAAGTGTGAGTGTTGGTGGTGTCAGTGAGGCTCAAACCATGGGTGGCAGTGAGGCAGGAGATATGCAAATGGTTGAAGCTGGAAATATGGTCATTTCCATACAAGTCCTGAGGAATGTCACTGACAATTTCAGTGAGAAGAATATATTGGGACAAGGAGGTTTTGGAACTGTTTATAAAGGTGAACTGCATGATGGTACAAGAATTGCAGTCAAAAGAATGGAGTGTGGCATAATAACTGGCAAAGGTGCAACAGAATTTAAGTCTGAAATAGCTGTTTTGACGAAGGTTCGCCACCGACATCTTGTTGCTCTTCTTGGCTATTGCTTGGATGGGAATGAGAAGCTTCTTGTGTATGAGTACATGCCTCAAGGAACACTAAGCAGCCATCTTTTTAACTGGTCAGAAGAAGGGCTGAAACCATTGGGATGGACTAGAAGATTGACCATTGCCTTGGATGTAGCAAGGGGTGTTGAGTACCTCCATGGCTTGGCCCATCAAAGCTTCATACACAGAGACTTGAAACCTTCAAACATTCTCCTTGGAGATGATATGAGGGCAAAAGTTGCAGATTTTGGTCTGGTGCGCCTTGCTCCAGAAGGCAAAGCTTCTATAGAAACAAGGATTGCAGGAACTTTTGGATATTTGGCACCAGAATATGCAGTTACCGGTCGTGTGACAACTAAAGTTGATGTGTTCAGCTTTGGTGTAATACTGATGGAAGTGATAACAGGAAGAAAAGCACTTGATGAGACCCAACCAGAGGATAGCATGCACCTTGTAACATGGTTCCGTCGAATGTACATAAACAAAGATTCATTCCGCAAGGCCATTGATCCCACACTCGAGCTCAACGAGGAAACACTTGCTAGCGTTCACACCGTAGCTGAGTTAGCTGGCCACTGTTGTGCCAGGGAACCATATCAAAGGCCTGACATGGGTCATGCTGTTAATGTGCTTTCTTCACTTGTAGAACTTTGGAAACCATCTGATCATAGTTCTGAAGATATATATGGTATTGACCTGGACATGTCGTTACCGCAAGCACTTAAGAAATGGCAGTCTTATGAAGGTGGAAGTCATATGGAGTCTTCATCTTCACTTCTTCCAAGCTTGGATAACACACAAACAAGTATACCTACGCGCCCATATGGATTTGCCGATTCTTTCACATCAGTAGATGGTAGATGA 2844 0.4339 MNKFKFESFFIFLSGFLSITAFLVNSQNDDASVMLSLKKALNPPESLGWSDPNPCNWVHVTCSDEKRVTRIQIGHMNLQGTLPFTLQNLTQLQHLELQYNNFSGPIPDLNGLTSLQVFMGSNNRFTSIPTSFFNGLSQLQAVEIDNNPFEEWEIPLSLQNASSLQNFSANSANVRGKLPDFFGSDVFPGLTHLHLAFNKIEGTLPLSFSGSQIETLWLNGQKGVGDAKLGGTVEVLKNMTFLSEVWLQSNGFTGPLPDFSGLKSLQVLSLRDNSFTGPVPSSLLSLKSLKVVNLTNNFLQGPMPVFGPDVEVDMRKDSNSFCLPGPGECDPRVQVLLSVVGLFGYPQRFAENWKGNDPCNDWIGITCSDGNVTVVNFEKMGLTGMISPEFAKLKSLQRLVLADNNITGSIPEELTTLPVLTQLNVANNQLFGKKPSFRSNVIVDTNGNKDIGKDKSSLTPQGPMSSEVPSARGENGTSSENGGKKSSSHVGVIVFAVVGAVFVVALIGLLVFCLLRVKQKRLRRVQSPNTLVIHPLHSGSDNESVKITVAGSSVSVGGVSEAQTMGGSEAGDMQMVEAGNMVISIQVLRNVTDNFSEKNILGQGGFGTVYKGELHDGTRIAVKRMECGIITGKGATEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSSHLFNWSEEGLKPLGWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMEVITGRKALDETQPEDSMHLVTWFRRMYINKDSFRKAIDPTLELNEETLASVHTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPSDHSSEDIYGIDLDMSLPQALKKWQSYEGGSHMESSSSLLPSLDNTQTSIPTRPYGFADSFTSVDGR* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0322 947 Pfam Protein tyrosine and serine/threonine kinase 598 866 IPR001245 GO:0004672|GO:0006468
Lan11g0322 947 Gene3D Phosphorylase Kinase; domain 1 556 672 - -
Lan11g0322 947 ProSitePatterns Protein kinases ATP-binding region signature. 601 623 IPR017441 GO:0005524
Lan11g0322 947 Gene3D Ribonuclease Inhibitor 331 455 IPR032675 -
Lan11g0322 947 ProSiteProfiles Protein kinase domain profile. 595 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0322 947 SMART LRR_typ_2 112 135 IPR003591 -
Lan11g0322 947 SMART LRR_typ_2 187 210 IPR003591 -
Lan11g0322 947 SMART LRR_typ_2 393 417 IPR003591 -
Lan11g0322 947 SMART LRR_typ_2 262 286 IPR003591 -
Lan11g0322 947 MobiDBLite consensus disorder prediction 448 486 - -
Lan11g0322 947 SUPERFAMILY L domain-like 42 435 - -
Lan11g0322 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 720 732 IPR008271 GO:0004672|GO:0006468
Lan11g0322 947 Gene3D Transferase(Phosphotransferase) domain 1 673 890 - -
Lan11g0322 947 PANTHER RECEPTOR PROTEIN KINASE TMK1 12 947 - -
Lan11g0322 947 SUPERFAMILY Protein kinase-like (PK-like) 572 879 IPR011009 -
Lan11g0322 947 SMART serkin_6 595 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0322 947 Pfam Leucine rich repeat N-terminal domain 333 368 IPR013210 -
Lan11g0322 947 Pfam Leucine rich repeat N-terminal domain 28 63 IPR013210 -
Lan11g0322 947 Gene3D Ribonuclease Inhibitor 27 329 IPR032675 -
Lan11g0322 947 PANTHER OSJNBA0070M12.3 PROTEIN 12 947 - -
Lan11g0322 947 CDD STKc_IRAK 601 874 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0322 Lan-Chr11 2098341 2102606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0322 77 877 Receptor kinase-like Gene Family AT5G07280 30.854 4.99e-81 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lan11g0322 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0322 - K00924 aprc:113846741 1527.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0322 11 2098341 2102606 Lan9g1269 9 19939752 19943576 LSH