Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0319 ATGAGTGCTTCTTCGTCCACCAATGAGAACAAGGCTGAGCAGGTTGACAATTGCAAAGCCCAAGAGAAAAGGTGGCTTGATGTTTTTTTGGGGGAAACTTTCTTTGGTTCCTGTGCAACTCATCCATTTCGTAGGAATGAGCTAAATAAGTACTGCATAAATTGCGATGTATCAGCTTGCGAGTACTGTATTTCGTCTGGTTCTCATCGCCATCACAATATTCTGAAAGTCTATAGACATATTCACAAAGTAGTTGTCTCCCTACGTGCTATGGAAAAGCATATTGACTGCTCAGAAATTCAGCGTTATAAATGCAATAAGCGAGTGGTTATTTCTCTATATCCTCTGCCATCCTATGGTGTAGCACCAAATGTTGAGGCATCATGCAAAAGTTGCAGTTGGAAGTTGACTGAACCCAATTTATATTCCTATTGCTCCATTTCTTGTAAGGTCAAATCAGTCTTAAGAAATCCTGATGATTCTGGTCTTGCCCGTCCTTATCTAGAGAGTCGGGTAAAGATAAGGAAGGGGGCAACTTTTGAACCCCGAAAGCCGATGGAGGAGATGCAGAAAGAAAACGGTAACCCTGTGTCATTTCGTAAAAGAAAGAGAAAGGGAACACCCCATAGAGCTCCTTTCTTCTAA 645 0.4171 MSASSSTNENKAEQVDNCKAQEKRWLDVFLGETFFGSCATHPFRRNELNKYCINCDVSACEYCISSGSHRHHNILKVYRHIHKVVVSLRAMEKHIDCSEIQRYKCNKRVVISLYPLPSYGVAPNVEASCKSCSWKLTEPNLYSYCSISCKVKSVLRNPDDSGLARPYLESRVKIRKGATFEPRKPMEEMQKENGNPVSFRKRKRKGTPHRAPFF* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0319 214 Gene3D Classic Zinc Finger 35 77 - -
Lan11g0319 214 Pfam B-box zinc finger 37 76 IPR000315 GO:0008270
Lan11g0319 214 Pfam PLATZ transcription factor 79 151 IPR006734 -
Lan11g0319 214 MobiDBLite consensus disorder prediction 200 214 - -
Lan11g0319 214 MobiDBLite consensus disorder prediction 178 199 - -
Lan11g0319 214 MobiDBLite consensus disorder prediction 178 214 - -
Lan11g0319 214 ProSiteProfiles Zinc finger B-box type profile. 38 77 IPR000315 GO:0008270
Lan11g0319 214 SUPERFAMILY B-box zinc-binding domain 38 91 - -
Lan11g0319 214 CDD Bbox2 38 77 - -
Lan11g0319 214 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 214 - -
Lan11g0319 214 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 5 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0319 Lan-Chr11 2083828 2088857 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lan11g0319 PLATZ 1.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0319 - - lang:109355923 229.18