Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0318 ATGATGAGTGCTTCTTCCTCTAGAAAAGTGAAAAAGAATGAGCAGGTGGCCCAATGTAAAGTCAACAAGCCAAGGTGGCTTGATGCTTTGCTGGGAGAAACTTTTTTCGACTCTTGTGAAGCTCACCCATTTCGCAGGAACGAGTTAAATCAATACTGCATAAATTGCAATCAACCAGCTTGTCGATTTTGTGTATCATCAGGTCCCCATGACCATCACCAGATACTTCAAATCTATAGATATGTTTACAGAGATGCTGTCTACCTCAGTGATATGAAAAAGTTTATTGACTGCTCAGGAATTCAGCCCTACAAATGTAACAGCAAATGGGTTATTTCTCTGAATCCTTTGCCACACAATGGTTCAGCAGTAAATTATGAGGCGTCATGCAGCATCTGCAGTAGAAAATTGACTGAACCTCATAAATATAGCTACTGTTCGATCTCATGCAAGGTGAAAGCTGTTTTAGAGAAACCTAATGATTCATTCCCTCCCTTCATTTCCATCCAGAGTCCTTCCCATGAGACACAAGAGGAAACTTCTGAACCTCAAATGGAGGAAGCCACTGAACAACAAAATGAGGAAACTTCTAAACCACAATCACTGCGGAAAAGAAGAAGAAAGGGAACACCACACAGAGCTCCCTTCTTCTAA 654 0.4113 MMSASSSRKVKKNEQVAQCKVNKPRWLDALLGETFFDSCEAHPFRRNELNQYCINCNQPACRFCVSSGPHDHHQILQIYRYVYRDAVYLSDMKKFIDCSGIQPYKCNSKWVISLNPLPHNGSAVNYEASCSICSRKLTEPHKYSYCSISCKVKAVLEKPNDSFPPFISIQSPSHETQEETSEPQMEEATEQQNEETSKPQSLRKRRRKGTPHRAPFF* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0318 217 MobiDBLite consensus disorder prediction 165 217 - -
Lan11g0318 217 ProSiteProfiles Zinc finger B-box type profile. 39 78 IPR000315 GO:0008270
Lan11g0318 217 CDD Bbox2 39 78 - -
Lan11g0318 217 SUPERFAMILY B-box zinc-binding domain 39 81 - -
Lan11g0318 217 Gene3D Classic Zinc Finger 35 95 - -
Lan11g0318 217 MobiDBLite consensus disorder prediction 202 217 - -
Lan11g0318 217 Pfam PLATZ transcription factor 80 152 IPR006734 -
Lan11g0318 217 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 217 - -
Lan11g0318 217 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 4 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0318 Lan-Chr11 2079602 2082506 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lan11g0318 PLATZ 2.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0318 - - lang:109356337 276.944