Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0311 ATGGCCAAAACTAGGAAATTCCTCTCCCTATCATTCTTCATAACCTTTCTTCTTTCTCTTGCCTTCTTCCCTTTCCAATCACTGTCATCATCACACACAAAGACTTACCTCTATGGTGGGTGCACTCAGCAAAGTTACACTCCAAACTCACCCTATGAGTCCAACCTCGACTCGCTCCTCACCTCCCTGGTCAACTCAGCCACATACTCTTCCTACAACAACTTCACAATCCTAGGTTCCACCCAACAGGACGCGGTATACGGCCTCTACCAATGTCGCGGTGACCTCTCCATGCCGGATTGTGCTACTTGCGTTGCGAGCGCCGTCACACGCACTGGGGACTTATGCCGACAGACGTGTGGCGGCGCCATGCAGCTTGATGGCTGTTTTGTGAAGTATGACAATGCCACTTTCTTAGGAGTAGAAGACAAGACGGTGGTGCTGAAGAAATGTGGACCCTCTGTGGGGTACAACCCAGAGGCCATGGGTAGCCGGGATGCTGTGCTAGCCGGGCTTGTGGGCTCCAGCGGGCCTTTCCGTGAGGGAGGGTCCGGTGGAGTACGTGGCATAGCACAGTGTACCGGAGACCTGAGCTTTGGGGAGTGTCAGGATTGTTTGTCTGAAGCAATATCACGGTTGAAGAGCGATTGTGGCACGGCGGATTATGGTGACATGTTCTTGGGAAAGTGCTATGCTAGGTACTCTACCGGTGGGGCCCATGATACCTCCAAGGCCCACGGTAAATCAAATAATAGAGGAGCAAAGACTTTTGCGATAATTATTGGTTTATTAGCAGGAGCAGCTATACTTATTGTTTTCCTAGCTTTCTTAAGCAAGATTTGTCTAAGACAAGGGAAATAA 861 0.5029 MAKTRKFLSLSFFITFLLSLAFFPFQSLSSSHTKTYLYGGCTQQSYTPNSPYESNLDSLLTSLVNSATYSSYNNFTILGSTQQDAVYGLYQCRGDLSMPDCATCVASAVTRTGDLCRQTCGGAMQLDGCFVKYDNATFLGVEDKTVVLKKCGPSVGYNPEAMGSRDAVLAGLVGSSGPFREGGSGGVRGIAQCTGDLSFGECQDCLSEAISRLKSDCGTADYGDMFLGKCYARYSTGGAHDTSKAHGKSNNRGAKTFAIIIGLLAGAAILIVFLAFLSKICLRQGK* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0311 286 ProSiteProfiles Gnk2-homologous domain profile. 34 138 IPR002902 -
Lan11g0311 286 ProSiteProfiles Gnk2-homologous domain profile. 139 239 IPR002902 -
Lan11g0311 286 Pfam Salt stress response/antifungal 184 236 IPR002902 -
Lan11g0311 286 Pfam Salt stress response/antifungal 41 135 IPR002902 -
Lan11g0311 286 Gene3D - 165 237 IPR038408 -
Lan11g0311 286 Gene3D - 33 138 IPR038408 -
Lan11g0311 286 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 9 283 - -
Lan11g0311 286 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 9 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0311 Lan-Chr11 2025648 2027891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0311 1 275 Receptor kinase-like Gene Family AT5G40380 27.931 1.27e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0311 - - adu:107457936 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0203 4 3408831 3409401 Lan11g0311 11 2025648 2027891 PCT
Lan16g0612 16 7567868 7570559 Lan11g0311 11 2025648 2027891 PCT
Lan11g0311 11 2025648 2027891 Lan4g0203 4 3408831 3409401 PCT
Lan11g0311 11 2025648 2027891 Lan16g0612 16 7567868 7570559 PCT