Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan11g0280 | ATGGTTGATGCAATTGATTTGACTGGTGATGGAGGAGTCATCAAGACCATTGTGAGAAAAAGCAAACCTGATGCTGTGGCTCCAACTGAAGATTTTCCTCTTGTCGATGTGCATTATGAAGGCACACTTGCTGATACTGGAGATGTATTTGACACTACCCATGAAGATAACACTATCTTCTCTTTTGAGGTTGGAAAAGGCAGTGTTATCAAGGCTTGGGACATTGCAGTGAAAACCATGAAGGTAGGAGAAATAGCAAAAATAGCATGCAAGCCAGAGTATGCATATGGTAGTGCAGGATCTCCACCAGATATTCCCCCAGATGCGACACTTATTTTTGAAGTTGAGCTACTTGCCTGTAAGCCAAGGAAGGGTTCCAGCCTGGGAAGTGTTTCAGAGGAGAGGGCTAGACTCGACGAGCTGAAGAAACAGCGAGAGATAGCCGCTGCTGCGAAAGAAGAGGAGAAGAAGAAGAGAGAAGAAGCAAAAGCAGCAGCTGCTGCTCGGGTGCAAGCGAAGTTAGATGCCAAGAAAGGTCAAGGAAAGGGTAAAGGTAAAGGAAAGTAG | 567 | 0.455 | MVDAIDLTGDGGVIKTIVRKSKPDAVAPTEDFPLVDVHYEGTLADTGDVFDTTHEDNTIFSFEVGKGSVIKAWDIAVKTMKVGEIAKIACKPEYAYGSAGSPPDIPPDATLIFEVELLACKPRKGSSLGSVSEERARLDELKKQREIAAAAKEEEKKKREEAKAAAAARVQAKLDAKKGQGKGKGKGK* | 189 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan11g0280 | 188 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 188 | - | - | |
| Lan11g0280 | 188 | MobiDBLite | consensus disorder prediction | 150 | 188 | - | - | |
| Lan11g0280 | 188 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-1 | 1 | 188 | - | - | |
| Lan11g0280 | 188 | MobiDBLite | consensus disorder prediction | 150 | 166 | - | - | |
| Lan11g0280 | 188 | Coils | Coil | 131 | 170 | - | - | |
| Lan11g0280 | 188 | Gene3D | - | 2 | 120 | IPR046357 | GO:0003755 | |
| Lan11g0280 | 188 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 32 | 121 | IPR001179 | GO:0003755 | |
| Lan11g0280 | 188 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 34 | 118 | IPR001179 | GO:0003755 | |
| Lan11g0280 | 188 | SUPERFAMILY | FKBP-like | 8 | 124 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan11g0280 | Lan-Chr11 | 1832966 | 1840406 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan11g0280 | 4 | 155 | Calmodulin-binding Proteins | AT5G48570 | 32.298 | 1.13e-11 | 60.8 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan11g0280 | K01802 | - | gmx:100500018 | 276.559 |