Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0279 ATGGAATCTGTTGTGTCTGAACTAGAAGGCACGCTTTTGAAGCATTTGGATATATTCTCTTATTTCATGTTAGTAGCCTTTGAAGCATCGGGTTTGATTCGTTTTGCCTTGTTGTTAATTCTATGGCCCGTTGTTCGTTTGTTAGATATATTTGGCATGGAGGAAATGGCTCTTAAGGTGATGATCTTTGTGTCCTCAGCTGGGGTACCTAAAACTGAGCTTGAGTCCGTGGCAAGGGCAGTTTTGCCAAAGTTCTACATGGATGATCTTGACATGGAAGCTTGGAAGGTGTTTATCTCCAATGATAAGAGGGTTGTGGTGACTAAGATGCCAAGAATAATGGTGGAGAGGTTTGTTAAGGAGCATTTACGTGCTGATGAGGTTGTTGGGTGCGAGCTCTCTTTCAATGGGTTTGGGCTAGCCACTGGTATGGTCCAAGGTGACTCGATTAGTACCATTTCTGAAAGGGTTACTATGCTTTTTAAGGAAGAAGATGCACCCACTTTGGGCATGGGAAGGCCTAGTACTTCAACCTATAATTCCTTCTCCAAGCTTTGCAAGGAACAAATGCACCCACCATTCTTAACAAGCCAAAAGTATGACCAGGTTCTCCGTCCACTCCCGGTGATCTTCCACGACGGCCGCCTGGTGAAGCGGCCAACAGCGTTCACCTCCCTATTAATCCTCTTATGGATCCCTATAGGCATTTTACTCGCCATAATACGAATCACCATAGGCATCATTTTACCCTTTTGGGCTATCCCCTATTTATCTACCATACTTGGTGGAAATGTGATTATGAAGGGTAAACCACCCTCTCCTCCCTCTAATGGGAATCCTGGTGTCTTATTCGTATGCACTCATCGAACTCTTCTTGATCCAGTTGTGCTCGGTTCAGTACTCCAACGCAAAATCCCAGCAGTCACATACTCTATCTCTCGATTTTCAGAGATACTATCTCCGATTCCAACCTTGAGGTTAACAAGGATACGAAATGTGGACGCTGAAAAAATCAAACGTGAACTATCCAAAGGCGATTTAGTGGTGTGCCCAGAAGGAACAACTTGTCGTGAACCTTTCCTTTTAAGGTTTAGTGCACTCTTTGCTGAGTTAACTGACAGAATTGTCCCAGTGGCCATGAACTATAGAGTAGGGTTCTTCCATGCAACCACTGCTAGGGGTTGGAAAGGTTTGGACCCTATTTTCTTCTTCATGAACCCAAGGCCGATTTATGAGGTCACTTTCTTGAACCAGTTACCGGTTGAGGCTACATGTTCTTCGGGGAAGAGCCCTCATGATGTGGCTAACTATGTGCAGAGAATATTGGCGGCTACGTTAGGGTTTGAGTGCACCAACTTCACTCGAAAAGACAAGTATAGGGTCTTGGCTGGGAATGATGGCACTGTTTCATATATTTCATTGGTTGATCAGATAACGAAGGTGGTGAACACATTCAAGCCATTTTTAAAGTAA 1473 0.4426 MESVVSELEGTLLKHLDIFSYFMLVAFEASGLIRFALLLILWPVVRLLDIFGMEEMALKVMIFVSSAGVPKTELESVARAVLPKFYMDDLDMEAWKVFISNDKRVVVTKMPRIMVERFVKEHLRADEVVGCELSFNGFGLATGMVQGDSISTISERVTMLFKEEDAPTLGMGRPSTSTYNSFSKLCKEQMHPPFLTSQKYDQVLRPLPVIFHDGRLVKRPTAFTSLLILLWIPIGILLAIIRITIGIILPFWAIPYLSTILGGNVIMKGKPPSPPSNGNPGVLFVCTHRTLLDPVVLGSVLQRKIPAVTYSISRFSEILSPIPTLRLTRIRNVDAEKIKRELSKGDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPIFFFMNPRPIYEVTFLNQLPVEATCSSGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTVSYISLVDQITKVVNTFKPFLK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0279 490 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 223 470 - -
Lan11g0279 490 SMART plsc_2 282 383 IPR002123 GO:0016746
Lan11g0279 490 CDD LPLAT 282 443 - -
Lan11g0279 490 PANTHER ANCIENT UBIQUITOUS PROTEIN 2 480 - -
Lan11g0279 490 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 7 2 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0279 Lan-Chr11 1827994 1830502 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0279 3 489 Organic Solute Cotransporters AT3G11430 72.505 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0279 K13508 - zju:107413407 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0279 11 1827994 1830502 Lan11g0279 11 1827994 1830502 ECH
Lan2g1272 2 23706791 23708677 Lan11g0279 11 1827994 1830502 LSH
Lan11g0279 11 1827994 1830502 Lan9g1447 9 21296033 21298343 LSH
Lan11g0279 11 1827994 1830502 Lan2g1272 2 23706791 23708677 PCT
Lan11g0279 11 1827994 1830502 Lan9g1447 9 21296033 21298343 PCT